RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 EML5Q05BV3 1969 aa8.97□□□□□ -0.97
SMARCB1-207ENST00000491967 KIAA1549LQ6ZVL6 1849 aa8.96□□□□□ -0.97
SMARCB1-207ENST00000491967 CCDC163A0A0D9SF12 145 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 CHURC1-FNTBB4DL54 471 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 HRO43593 1189 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 OLFM2O95897 454 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 MYL1P05976 194 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 CMA1P23946 247 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 CASP1P29466 404 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 ATICP31939 592 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 CNR2P34972 360 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 AVPR1AP37288 418 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 NOP14P78316 857 aaKnown RBP8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 DNM1Q05193 864 aaKnown RBP8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 FAM160A1Q05DH4 1040 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 CUL4BQ13620 913 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 PDGFRLQ15198 375 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 ZNF77Q15935 545 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 TAF12Q16514 161 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 FSTL4Q6MZW2 842 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 C4orf50Q6ZRC1 276 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 Q6ZS52 159 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 SPATA2LQ8IUW3 424 aaPredicted RBP8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 KIAA2013Q8IYS2 634 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 PLEKHO2Q8TD55 490 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 PARD3BQ8TEW8 1205 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 MRPS31Q92665 395 aaKnown RBP8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 PAGE5Q96GU1 130 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 PCED1BQ96HM7 432 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 C8orf48Q96LL4 319 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 CGRRF1Q99675 332 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 SYT15Q9BQS2 421 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 RBM12Q9NTZ6 932 aaKnown RBP8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 FAM13BQ9NYF5 915 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 IL37Q9NZH6 218 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 MAGEC2Q9UBF1 373 aaPredicted RBP8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 ARHGAP26Q9UNA1 814 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 SMG5Q9UPR3 1016 aaKnown RBP8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 ZDHHC9Q9Y397 364 aa8.96□□□□□ -0.98
SMARCB1-207ENST00000491967 CNOT1A5YKK6 2376 aaKnown RBP8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 MYO18AQ92614 2054 aaKnown RBP8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 MYOFQ9NZM1 2061 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 CLIC2O15247 247 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 LRP3O75074 770 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 C4BPAP04003 597 aaKnown RBP8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 USP17L7P0C7H9 530 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 GNL1P36915 607 aaPredicted RBP8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 ME1P48163 572 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 PPP3CCP48454 512 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 AP3M2P53677 418 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 USP46P62068 366 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 ZXDBP98169 803 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 DMWDQ09019 674 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 STK4Q13043 487 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 USP4Q13107 963 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 PSMD2Q13200 908 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 PON2Q15165 354 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 SNX30Q5VWJ9 437 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 HS2ST1Q7LGA3 356 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 LONP2Q86WA8 852 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 HSCBQ8IWL3 235 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 RDH13Q8NBN7 331 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 KIAA0895Q8NCT3 520 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 STKLD1Q8NE28 680 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 GOLGA5Q8TBA6 731 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 OSCP1Q8WVF1 389 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 MYLPFQ96A32 169 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 CYP2S1Q96SQ9 504 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 DUSP9Q99956 384 aaKnown RBP8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 MRPL45Q9BRJ2 306 aaKnown RBP8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 BLZF1Q9H2G9 400 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 KCTD10Q9H3F6 313 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 EBF3Q9H4W6 596 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 FBRSL1Q9HCM7 1045 aaKnown RBP8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 SLC39A2Q9NP94 309 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 TMEM30AQ9NV96 361 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 USP25Q9UHP3 1055 aa8.95□□□□□ -0.98
SMARCB1-207ENST00000491967 TPRP12270 2363 aaKnown RBP8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 DNAH14Q0VDD8 3507 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 TRAV19A0A0A6YYK7 116 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 FAM92AA1XBS5 289 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 C2orf78A6NCI8 922 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 ZNF840PA6NDX5 716 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 PDXKO00764 312 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 IKBKBO14920 756 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 TRIM66O15016 1216 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 VNN1O95497 513 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 PDGFRBP09619 1106 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 DLATP10515 647 aaKnown RBP8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 CHRM1P11229 460 aaPredicted RBP8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 ARSAP15289 507 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 PTPN1P18031 435 aaKnown RBP8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 HDCP19113 662 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 TNNI1P19237 187 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 BDNFP23560 247 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 AFMP43652 599 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 GALK1P51570 392 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 MYL6P60660 151 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 PSMC1P62191 440 aaKnown RBP8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 SLC7A9P82251 487 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms