RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 GTSE1Q9NYZ3 720 aa9.51□□□□□ -0.89
COL6A4P1-203ENST00000491915 GCNT4Q9P109 453 aa9.51□□□□□ -0.89
COL6A4P1-203ENST00000491915 PCDHA5Q9Y5H7 936 aa9.51□□□□□ -0.89
COL6A4P1-203ENST00000491915 OTOL1A6NHN0 477 aaPredicted RBP9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 A8MXQ7 604 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 PROB1E7EW31 1015 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 DPYSL4O14531 572 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 MAPK13O15264 365 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 HLA-DRAP01903 254 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 SP9P0CG40 484 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 TRIM49P0CI25 452 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 TRIM49CP0CI26 452 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 NR2F2P24468 414 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 HOXC13P31276 330 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 GCLMP48507 274 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 VAMP7P51809 220 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 AP3M2P53677 418 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 PMS1P54277 932 aaKnown RBP9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 TNNC1P63316 161 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 ORC1Q13415 861 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 GAS6Q14393 721 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 SGSM1Q2NKQ1 1148 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 ZNF667Q5HYK9 610 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 ANKRD40Q6AI12 368 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 ISM2Q6H9L7 571 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 TXNDC11Q6PKC3 985 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 VSTM1Q6UX27 236 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 C4orf50Q6ZRC1 276 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 ACOT1Q86TX2 421 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 YAF2Q8IY57 180 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 SPATA20Q8TB22 786 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 BPIFB1Q8TDL5 484 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 TAS1R2Q8TE23 839 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 FAM3CQ92520 227 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 SEMA4DQ92854 862 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 CCDC47Q96A33 483 aaKnown RBP9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 SPATA17Q96L03 361 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 KCNK16Q96T55 309 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 FAM83CQ9BQN1 747 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 BCO2Q9BYV7 579 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 ZNF518BQ9C0D4 1074 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 OBP2AQ9NY56 170 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 NDRG2Q9UN36 371 aaKnown RBP9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 FRMD4BQ9Y2L6 1034 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 PIAS3Q9Y6X2 628 aa9.5□□□□□ -0.89
COL6A4P1-203ENST00000491915 DENND4CQ5VZ89 1909 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 C2orf78A6NCI8 922 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 GOLGA6L4A6NEF3 574 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 F8VP50 259 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 MAN2B1O00754 1011 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 BEST1O76090 585 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 ASS1P00966 412 aaKnown RBP9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 CHRNB1P11230 501 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 ARSAP15289 507 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 PSMC2P35998 433 aaKnown RBP9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 ZXDBP98169 803 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 FAM160A1Q05DH4 1040 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 MTAPQ13126 283 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 ZNF699Q32M78 642 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 TRIM68Q6AZZ1 485 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 TSSK4Q6SA08 328 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 SCARA5Q6ZMJ2 495 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 FAM186BQ8IYM0 893 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 CRYBG2Q8N1P7 616 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 CELF5Q8N6W0 485 aaKnown RBP9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 ARL14EPQ8N8R7 260 aaPredicted RBP9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 B3GALNT2Q8NCR0 500 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 CSGALNACT1Q8TDX6 532 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 MRPS31Q92665 395 aaKnown RBP9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 CHFRQ96EP1 664 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 TRMT2BQ96GJ1 504 aaKnown RBP9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 C8orf48Q96LL4 319 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 TIGD1Q96MW7 591 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 TWNKQ96RR1 684 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 RNF38Q9H0F5 515 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 LINC00597Q9H2U6 94 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 HPS4Q9NQG7 708 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 RBM12Q9NTZ6 932 aaKnown RBP9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 TDP1Q9NUW8 608 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 SPATA6Q9NWH7 488 aaPredicted RBP9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 HMGXB4Q9UGU5 601 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 CHORDC1Q9UHD1 332 aaPredicted RBP9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 R4GN57 208 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 WDFY4Q6ZS81 3184 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 ATG2BQ96BY7 2078 aa9.49□□□□□ -0.89
COL6A4P1-203ENST00000491915 RIF1Q5UIP0 2472 aaKnown RBP9.48□□□□□ -0.89
COL6A4P1-203ENST00000491915 ZNF840PA6NDX5 716 aa9.48□□□□□ -0.89
COL6A4P1-203ENST00000491915 SOBPA7XYQ1 873 aa9.48□□□□□ -0.89
COL6A4P1-203ENST00000491915 SPECC1L-ADORA2AF8WAN1 911 aa9.48□□□□□ -0.89
COL6A4P1-203ENST00000491915 GFRA3O60609 400 aa9.48□□□□□ -0.89
COL6A4P1-203ENST00000491915 KIF20AO95235 890 aa9.48□□□□□ -0.89
COL6A4P1-203ENST00000491915 CD44P16070 742 aaKnown RBP9.48□□□□□ -0.89
COL6A4P1-203ENST00000491915 HDCP19113 662 aa9.48□□□□□ -0.89
COL6A4P1-203ENST00000491915 BMP6P22004 513 aa9.48□□□□□ -0.89
COL6A4P1-203ENST00000491915 DDX6P26196 483 aaKnown RBP eCLIP9.48□□□□□ -0.89
COL6A4P1-203ENST00000491915 RPL13P26373 211 aaKnown RBP9.48□□□□□ -0.89
COL6A4P1-203ENST00000491915 ASPAP45381 313 aa9.48□□□□□ -0.89
COL6A4P1-203ENST00000491915 PGFP49763 221 aa9.48□□□□□ -0.89
COL6A4P1-203ENST00000491915 KPNA1P52294 538 aaPredicted RBP9.48□□□□□ -0.89
COL6A4P1-203ENST00000491915 NDST1P52848 882 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms