RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 MAGED2Q9UNF1 606 aaPredicted RBP17.3■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 DOCK8Q8NF50 2099 aa17.3■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 ANHXE9PGG2 379 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 F8VP50 259 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 PI4K2BG5E9Z4 385 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 ALADP13716 330 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 PRKCSHP14314 528 aaPredicted RBP17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 EEF1GP26641 437 aaKnown RBP17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 CACNA2D1P54289 1103 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 HTR4Q13639 388 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 TCP11X2Q5H9J9 407 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 PAQR9Q6ZVX9 377 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 MTSS1LQ765P7 747 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 ARHGEF19Q8IW93 802 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 SLC2A14Q8TDB8 520 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 NXPE3Q969Y0 559 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 TRMT2BQ96GJ1 504 aaKnown RBP17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 TMEM176AQ96HP8 235 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 ATXN3LQ9H3M9 355 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 IL21Q9HBE4 155 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 KRT82Q9NSB4 513 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 TMEM30AQ9NV96 361 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 UXTQ9UBK9 157 aaPredicted RBP17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 SORCS3Q9UPU3 1222 aa17.29■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 GTPBP10A4D1E9 387 aaKnown RBP17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 AP1G2O75843 785 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 RAD23BP54727 409 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 ANO6Q4KMQ2 910 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 VWA3BQ502W6 1294 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 ARHGAP15Q53QZ3 475 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 MIIPQ5JXC2 388 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 CDKAL1Q5VV42 579 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 GBP6Q6ZN66 633 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 UBR7Q8N806 425 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 SLC4A11Q8NBS3 891 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 CYFIP2Q96F07 1278 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 HEXIM2Q96MH2 286 aaKnown RBP17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 HNRNPABQ99729 332 aaKnown RBP17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 CRACR2AQ9BSW2 395 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 GPR88Q9GZN0 384 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 NAT10Q9H0A0 1025 aaKnown RBP17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 NDST4Q9H3R1 872 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 SLITRK6Q9H5Y7 841 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 DMAP1Q9NPF5 467 aaPredicted RBP17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 NUMBLQ9Y6R0 609 aa17.28■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 A0A0C4DFX4 3053 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 F11P03951 625 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 FAM200BP0CF97 657 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 ADORA2BP29275 332 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 ZXDAP98168 799 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 CYP4F8P98187 520 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 GCNT1Q02742 428 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 EXOC3L4Q17RC7 722 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 SKOR2Q2VWA4 1001 aaPredicted RBP17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 TRIM65Q6PJ69 517 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 POTEHQ6S545 545 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 PARM1Q6UWI2 310 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 DENND5BQ6ZUT9 1274 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 RRAGAQ7L523 313 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 RSAD2Q8WXG1 361 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 FGF14Q92915 247 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 KAT5Q92993 513 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 MYRFLQ96LU7 910 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 FANCLQ9NW38 375 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 EHD2Q9NZN4 543 aa17.27■□□□□ 0.36
MSH5-SAPCD1-206ENST00000491552 SYCE3A1L190 88 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 PES1O00541 588 aaKnown RBP17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 SLC9A1P19634 815 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 ACO1P21399 889 aaKnown RBP17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 TDGQ13569 410 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 STXBP5Q5T5C0 1151 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 GPR158Q5T848 1215 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 PPP1R26Q5T8A7 1209 aaPredicted RBP17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 PHLDB3Q6NSJ2 640 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 TMEM150AQ86TG1 271 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 AOPEPQ8N6M6 819 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 ST13P5Q8NFI4 369 aaPredicted RBP17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 ZSCAN18Q8TBC5 510 aaPredicted RBP17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 ZSWIM3Q96MP5 696 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 ASB16Q96NS5 453 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 KCNK16Q96T55 309 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 SMOQ99835 787 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 BPIFA3Q9BQP9 254 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 FUCA2Q9BTY2 467 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 TTLL2Q9BWV7 592 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 EPHX3Q9H6B9 360 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 CSNK1G1Q9HCP0 422 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 TAB2Q9NYJ8 693 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 PCDHB4Q9Y5E5 795 aa17.26■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 TADA3O75528 432 aa17.25■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 TPM2P07951 284 aa17.25■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 DDX6P26196 483 aaKnown RBP eCLIP17.25■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 PON1P27169 355 aa17.25■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 MAP3K7CLP57077 242 aa17.25■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 USP46P62068 366 aa17.25■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 KRT31Q15323 416 aa17.25■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 FAM78AQ5JUQ0 283 aa17.25■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 ARHGAP17Q68EM7 881 aa17.25■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 TMEM270Q6UE05 265 aa17.25■□□□□ 0.35
MSH5-SAPCD1-206ENST00000491552 ENOSF1Q7L5Y1 443 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms