RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 MAPRE1Q15691 268 aaKnown RBP19.31■□□□□ 0.68
COL9A3-214ENST00000490398 MLF2Q15773 248 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-214ENST00000490398 DCAF17Q5H9S7 520 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-214ENST00000490398 KRT39Q6A163 491 aa19.31■□□□□ 0.68
COL9A3-214ENST00000490398 VSTM1Q6UX27 236 aa19.31■□□□□ 0.68
COL9A3-214ENST00000490398 MFSD6LQ8IWD5 586 aa19.31■□□□□ 0.68
COL9A3-214ENST00000490398 NELFBQ8WX92 580 aa19.31■□□□□ 0.68
COL9A3-214ENST00000490398 DHTKD1Q96HY7 919 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-214ENST00000490398 MYRFLQ96LU7 910 aa19.31■□□□□ 0.68
COL9A3-214ENST00000490398 SLC22A12Q96S37 553 aa19.31■□□□□ 0.68
COL9A3-214ENST00000490398 TRMT61BQ9BVS5 477 aaKnown RBP19.31■□□□□ 0.68
COL9A3-214ENST00000490398 BCO2Q9BYV7 579 aa19.31■□□□□ 0.68
COL9A3-214ENST00000490398 CTNND2Q9UQB3 1225 aa19.31■□□□□ 0.68
COL9A3-214ENST00000490398 CCL26Q9Y258 94 aa19.31■□□□□ 0.68
COL9A3-214ENST00000490398 MTF2Q9Y483 593 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-214ENST00000490398 ARNTLO00327 626 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 PSMA7O14818 248 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 SLC16A3O15427 465 aaKnown RBP19.3■□□□□ 0.68
COL9A3-214ENST00000490398 CCDC130P13994 396 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 GLULP15104 373 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 PSMC3P17980 439 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 GTF2H1P32780 548 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 MXI1P50539 228 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 STARD6P59095 220 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 ARHGAP15Q53QZ3 475 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 TCERG1LQ5VWI1 586 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 FUKQ8N0W3 1084 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 MAB21L3Q8N8X9 362 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 C12orf29Q8N999 325 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 WHAMMQ8TF30 809 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 TATDN2Q93075 761 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 TRMT2BQ96GJ1 504 aaKnown RBP19.3■□□□□ 0.68
COL9A3-214ENST00000490398 ZFYVE19Q96K21 471 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 GCNAQ96QF7 691 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 KCNK16Q96T55 309 aa19.3■□□□□ 0.68
COL9A3-214ENST00000490398 DCNP07585 359 aaKnown RBP19.29■□□□□ 0.68
COL9A3-214ENST00000490398 CD58P19256 250 aa19.29■□□□□ 0.68
COL9A3-214ENST00000490398 FAM35AQ86V20 835 aa19.29■□□□□ 0.68
COL9A3-214ENST00000490398 SLC35C1Q96A29 364 aa19.29■□□□□ 0.68
COL9A3-214ENST00000490398 SPATA17Q96L03 361 aa19.29■□□□□ 0.68
COL9A3-214ENST00000490398 C8orf48Q96LL4 319 aa19.29■□□□□ 0.68
COL9A3-214ENST00000490398 MED15Q96RN5 788 aa19.29■□□□□ 0.68
COL9A3-214ENST00000490398 CYP2S1Q96SQ9 504 aa19.29■□□□□ 0.68
COL9A3-214ENST00000490398 ARID3AQ99856 593 aa19.29■□□□□ 0.68
COL9A3-214ENST00000490398 DDX23Q9BUQ8 820 aaKnown RBP19.29■□□□□ 0.68
COL9A3-214ENST00000490398 NIF3L1Q9GZT8 377 aa19.29■□□□□ 0.68
COL9A3-214ENST00000490398 BRD9Q9H8M2 597 aa19.29■□□□□ 0.68
COL9A3-214ENST00000490398 KIAA1468Q9P260 1216 aa19.29■□□□□ 0.68
COL9A3-214ENST00000490398 ARIH1Q9Y4X5 557 aaPredicted RBP19.29■□□□□ 0.68
COL9A3-214ENST00000490398 PTPRDP23468 1912 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 BEST1O76090 585 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 P4HA1P13674 534 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 FCHO2Q0JRZ9 810 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 STIM1Q13586 685 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 PHLDB3Q6NSJ2 640 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 TPRG1Q6ZUI0 275 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 DENND5BQ6ZUT9 1274 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 MON1AQ86VX9 555 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 CMTM8Q8IZV2 173 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 CRYBG2Q8N1P7 616 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 ZMIZ2Q8NF64 920 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 TTC8Q8TAM2 541 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 DEPDC1BQ8WUY9 529 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 USP13Q92995 863 aaPredicted RBP19.28■□□□□ 0.68
COL9A3-214ENST00000490398 PHOX2BQ99453 314 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 GTPBP4Q9BZE4 634 aaKnown RBP19.28■□□□□ 0.68
COL9A3-214ENST00000490398 ELOVL4Q9GZR5 314 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 TRPC7Q9HCX4 862 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 FAM49BQ9NUQ9 324 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 RAB20Q9NX57 234 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 DLGAP2Q9P1A6 1054 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 COL4A2P08572 1712 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 USP34Q70CQ2 3546 aa19.28■□□□□ 0.68
COL9A3-214ENST00000490398 VPS13AQ96RL7 3174 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 C2orf78A6NCI8 922 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 ZNF263O14978 683 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 GALR2O43603 387 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-214ENST00000490398 WEE1P30291 646 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 PLA2G5P39877 138 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 SOX9P48436 509 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 PFKPQ01813 784 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 NHLH1Q02575 133 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 INCA1Q0VD86 236 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 FILIP1Q7Z7B0 1213 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 FBXL13Q8NEE6 735 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 SLC2A14Q8TDB8 520 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 MRPS31Q92665 395 aaKnown RBP19.27■□□□□ 0.68
COL9A3-214ENST00000490398 SMOQ99835 787 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 MED10Q9BTT4 135 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 TTLL2Q9BWV7 592 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 LMBRD1Q9NUN5 540 aa19.27■□□□□ 0.68
COL9A3-214ENST00000490398 ARMCX3Q9UH62 379 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-214ENST00000490398 KANSL1LA0AUZ9 987 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 H0Y858 1186 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 TRIM66O15016 1216 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 CILPO75339 1184 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 RFX1P22670 979 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 TARSP26639 723 aaKnown RBP19.26■□□□□ 0.67
COL9A3-214ENST00000490398 ANXA13P27216 316 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 PRKCQQ04759 706 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms