RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 FOXD4L6Q3SYB3 417 aaPredicted RBP7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 CTXN3Q4LDR2 81 aa7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 ZNF280DQ6N043 979 aa7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 FOXD4L3Q6VB84 417 aaPredicted RBP7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 GPR155Q7Z3F1 870 aa7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 KRT25Q7Z3Z0 450 aa7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 DNAJB7Q7Z6W7 309 aaPredicted RBP7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 NOSTRINQ8IVI9 506 aa7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 C4orf19Q8IY42 314 aa7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 EDARADDQ8WWZ3 215 aa7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 USP13Q92995 863 aaPredicted RBP7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 CD101Q93033 1021 aa7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 PSMG2Q969U7 264 aa7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 PRIMPOLQ96LW4 560 aa7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 TBC1D32Q96NH3 1257 aa7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 SLC46A2Q9BY10 475 aa7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 C6orf50Q9HD87 102 aa7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 MMP17Q9ULZ9 603 aa7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 SPENQ96T58 3664 aaKnown RBP7.8□□□□□ -1.16
PDLIM1-203ENST00000490391 OBSL1O75147 1896 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 FAM149AA5PLN7 773 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 B8ZZF3 427 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 K7EQS6 105 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 ERVH48-1M5A8F1 160 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 ATXN1LP0C7T5 689 aaKnown RBP7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 CPB1P15086 417 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 CDC27P30260 824 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 AMPD2Q01433 879 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 DUSP4Q13115 394 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 PSMD2Q13200 908 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 PPP2R5CQ13362 524 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 RTN1Q16799 776 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 FAM187BQ17R55 369 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 C2orf27AQ580R0 203 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 XKR9Q5GH70 373 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 EEF1DP3Q658K8 133 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 CDCA2Q69YH5 1023 aaPredicted RBP7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 CMTM8Q8IZV2 173 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 TTC9BQ8N6N2 239 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 SPACA7Q96KW9 195 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 SUSD3Q96L08 255 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 LXNQ9BS40 222 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 ECT2Q9H8V3 914 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 PRMT7Q9NVM4 692 aaPredicted RBP7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 USP20Q9Y2K6 914 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 GDAQ9Y2T3 454 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 ASB3Q9Y575 518 aa7.79□□□□□ -1.16
PDLIM1-203ENST00000490391 SMIM28A0A1B0GU29 152 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 A0A1W2PQD8 194 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 E9PAM4 449 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 PODXLO00592 558 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 GNB5O14775 395 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 N4BP3O15049 544 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 DKC1O60832 514 aaKnown RBP eCLIP7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 FGF19O95750 216 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 P4HBP07237 508 aaKnown RBP7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 SYPP08247 313 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 OR4Q2P0C623 313 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 GNA11P29992 359 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 EPHB3P54753 998 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 HDAC1Q13547 482 aaPredicted RBP7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 PDGFRLQ15198 375 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 SMAD1Q15797 465 aaKnown RBP7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 ARHGAP15Q53QZ3 475 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 XKR4Q5GH76 650 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 COLEC12Q5KU26 742 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 LMBRD2Q68DH5 695 aaPredicted RBP7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 CENPPQ6IPU0 288 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 ALKAL1Q6UXT8 129 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 RABEPKQ7Z6M1 372 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 TMEM150AQ86TG1 271 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 FMNL3Q8IVF7 1028 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 SLC41A1Q8IVJ1 513 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 GALNT15Q8N3T1 639 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 CCDC33Q8N5R6 958 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 TBCKQ8TEA7 893 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 WBP1Q96G27 269 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 ZMAT2Q96NC0 199 aaKnown RBP7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 PGLYRP2Q96PD5 576 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 PI4K2AQ9BTU6 479 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 ZFP64Q9NPA5 681 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 RGL1Q9NZL6 768 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 GDF2Q9UK05 429 aaPredicted RBP7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 BRPF3Q9ULD4 1205 aa7.78□□□□□ -1.16
PDLIM1-203ENST00000490391 SGK1O00141 431 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 AP5Z1O43299 807 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 SOAT2O75908 522 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 ALDH1A2O94788 518 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 OAZ2O95190 189 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 CSRP3P50461 194 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 SEC13P55735 322 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 CYP4A11Q02928 519 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 TLE3Q04726 772 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 ZNF33AQ06730 810 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 GRIK2Q13002 908 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 GPR17Q13304 367 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 GAB4Q2WGN9 574 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 ARTNQ5T4W7 220 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 DBX2Q6ZNG2 339 aa7.77□□□□□ -1.17
PDLIM1-203ENST00000490391 OTUD6AQ7L8S5 288 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms