RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 GTF2BQ00403 316 aa8.83□□□□□ -1
USP39-216ENST00000490193 NFE2Q16621 373 aaPredicted RBP8.83□□□□□ -1
USP39-216ENST00000490193 EML3Q32P44 896 aa8.83□□□□□ -1
USP39-216ENST00000490193 USP39Q53GS9 565 aaKnown RBP8.83□□□□□ -1
USP39-216ENST00000490193 WSCD1Q658N2 575 aa8.83□□□□□ -1
USP39-216ENST00000490193 NT5DC4Q86YG4 428 aa8.83□□□□□ -1
USP39-216ENST00000490193 ANKK1Q8NFD2 765 aa8.83□□□□□ -1
USP39-216ENST00000490193 TSTD1Q8NFU3 115 aa8.83□□□□□ -1
USP39-216ENST00000490193 OLIG1Q8TAK6 271 aa8.83□□□□□ -1
USP39-216ENST00000490193 USP33Q8TEY7 942 aa8.83□□□□□ -1
USP39-216ENST00000490193 FIZ1Q96SL8 496 aa8.83□□□□□ -1
USP39-216ENST00000490193 REEP2Q9BRK0 252 aa8.83□□□□□ -1
USP39-216ENST00000490193 PYM1Q9BRP8 204 aaKnown RBP8.83□□□□□ -1
USP39-216ENST00000490193 SCNM1Q9BWG6 230 aa8.83□□□□□ -1
USP39-216ENST00000490193 TMLHEQ9NVH6 421 aa8.83□□□□□ -1
USP39-216ENST00000490193 STYXL1Q9Y6J8 313 aa8.83□□□□□ -1
USP39-216ENST00000490193 PI4KAP42356 2102 aa8.83□□□□□ -1
USP39-216ENST00000490193 NPHP3-ACAD11A0A0J9YXS1 232 aa8.82□□□□□ -1
USP39-216ENST00000490193 SRRM3A6NNA2 597 aaPredicted RBP8.82□□□□□ -1
USP39-216ENST00000490193 KPNA7A9QM74 516 aa8.82□□□□□ -1
USP39-216ENST00000490193 K7ENM7 598 aa8.82□□□□□ -1
USP39-216ENST00000490193 USP17L7P0C7H9 530 aa8.82□□□□□ -1
USP39-216ENST00000490193 SPINK2P20155 84 aa8.82□□□□□ -1
USP39-216ENST00000490193 GBP1P32455 592 aa8.82□□□□□ -1
USP39-216ENST00000490193 PNPLA4P41247 253 aa8.82□□□□□ -1
USP39-216ENST00000490193 IFNAR2P48551 515 aa8.82□□□□□ -1
USP39-216ENST00000490193 RPL10AP62906 217 aaKnown RBP8.82□□□□□ -1
USP39-216ENST00000490193 TSPY1Q01534 308 aa8.82□□□□□ -1
USP39-216ENST00000490193 NR1H3Q13133 447 aa8.82□□□□□ -1
USP39-216ENST00000490193 SV2CQ496J9 727 aa8.82□□□□□ -1
USP39-216ENST00000490193 ARL6IP4Q66PJ3 421 aaKnown RBP8.82□□□□□ -1
USP39-216ENST00000490193 CYP2U1Q7Z449 544 aa8.82□□□□□ -1
USP39-216ENST00000490193 LAPTM4BQ86VI4 370 aa8.82□□□□□ -1
USP39-216ENST00000490193 KIAA1958Q8N8K9 716 aa8.82□□□□□ -1
USP39-216ENST00000490193 FAM184AQ8NB25 1140 aa8.82□□□□□ -1
USP39-216ENST00000490193 SPATA18Q8TC71 538 aa8.82□□□□□ -1
USP39-216ENST00000490193 ZNF560Q96MR9 790 aa8.82□□□□□ -1
USP39-216ENST00000490193 SLC22A12Q96S37 553 aa8.82□□□□□ -1
USP39-216ENST00000490193 PKMYT1Q99640 499 aa8.82□□□□□ -1
USP39-216ENST00000490193 ACBD6Q9BR61 282 aa8.82□□□□□ -1
USP39-216ENST00000490193 ST6GALNAC4Q9H4F1 302 aa8.82□□□□□ -1
USP39-216ENST00000490193 PARVGQ9HBI0 331 aa8.82□□□□□ -1
USP39-216ENST00000490193 DUS2Q9NX74 493 aaKnown RBP8.82□□□□□ -1
USP39-216ENST00000490193 DPP3Q9NY33 737 aa8.82□□□□□ -1
USP39-216ENST00000490193 GCNT4Q9P109 453 aa8.82□□□□□ -1
USP39-216ENST00000490193 MMP17Q9ULZ9 603 aa8.82□□□□□ -1
USP39-216ENST00000490193 NEUROG3Q9Y4Z2 214 aa8.82□□□□□ -1
USP39-216ENST00000490193 CEP192Q8TEP8 1941 aa8.82□□□□□ -1
USP39-216ENST00000490193 TRAV19A0A0A6YYK7 116 aa8.81□□□□□ -1
USP39-216ENST00000490193 UPK3BL1B0FP48 263 aa8.81□□□□□ -1
USP39-216ENST00000490193 PATE3B3GLJ2 98 aa8.81□□□□□ -1
USP39-216ENST00000490193 ANKRD63C9JTQ0 380 aa8.81□□□□□ -1
USP39-216ENST00000490193 UPK3BL2E5RIL1 263 aa8.81□□□□□ -1
USP39-216ENST00000490193 K7EQS6 105 aa8.81□□□□□ -1
USP39-216ENST00000490193 TNFRSF10BO14763 440 aa8.81□□□□□ -1
USP39-216ENST00000490193 TRAK2O60296 914 aa8.81□□□□□ -1
USP39-216ENST00000490193 EIF5BO60841 1220 aaKnown RBP8.81□□□□□ -1
USP39-216ENST00000490193 PRPF40AO75400 957 aaKnown RBP8.81□□□□□ -1
USP39-216ENST00000490193 TOP3BO95985 862 aaKnown RBP8.81□□□□□ -1
USP39-216ENST00000490193 CKMP06732 381 aa8.81□□□□□ -1
USP39-216ENST00000490193 PFKLP17858 780 aa8.81□□□□□ -1
USP39-216ENST00000490193 BCKDHBP21953 392 aa8.81□□□□□ -1
USP39-216ENST00000490193 OPRD1P41143 372 aa8.81□□□□□ -1
USP39-216ENST00000490193 P2RY2P41231 377 aa8.81□□□□□ -1
USP39-216ENST00000490193 DPP6P42658 865 aa8.81□□□□□ -1
USP39-216ENST00000490193 GPR15P49685 360 aa8.81□□□□□ -1
USP39-216ENST00000490193 ACOT2P49753 483 aa8.81□□□□□ -1
USP39-216ENST00000490193 CDR1P51861 262 aa8.81□□□□□ -1
USP39-216ENST00000490193 IRX4P78413 519 aa8.81□□□□□ -1
USP39-216ENST00000490193 MRPS21P82921 87 aaKnown RBP8.81□□□□□ -1
USP39-216ENST00000490193 LMAN2Q12907 356 aa8.81□□□□□ -1
USP39-216ENST00000490193 ZRSR1Q15695 479 aaKnown RBP8.81□□□□□ -1
USP39-216ENST00000490193 CRY1Q16526 586 aa8.81□□□□□ -1
USP39-216ENST00000490193 GAB4Q2WGN9 574 aa8.81□□□□□ -1
USP39-216ENST00000490193 CFAP221Q4G0U5 840 aa8.81□□□□□ -1
USP39-216ENST00000490193 HSF5Q4G112 596 aaPredicted RBP8.81□□□□□ -1
USP39-216ENST00000490193 RILPL1Q5EBL4 403 aa8.81□□□□□ -1
USP39-216ENST00000490193 INTS6LQ5JSJ4 861 aaKnown RBP8.81□□□□□ -1
USP39-216ENST00000490193 SPDYCQ5MJ68 293 aa8.81□□□□□ -1
USP39-216ENST00000490193 PEAR1Q5VY43 1037 aaPredicted RBP8.81□□□□□ -1
USP39-216ENST00000490193 SLFN12LQ6IEE8 588 aa8.81□□□□□ -1
USP39-216ENST00000490193 CRELD2Q6UXH1 353 aaPredicted RBP8.81□□□□□ -1
USP39-216ENST00000490193 EFCAB13Q8IY85 973 aa8.81□□□□□ -1
USP39-216ENST00000490193 MYCT1Q8N699 235 aa8.81□□□□□ -1
USP39-216ENST00000490193 MDGA1Q8NFP4 955 aa8.81□□□□□ -1
USP39-216ENST00000490193 ZCCHC14Q8WYQ9 949 aaKnown RBP8.81□□□□□ -1
USP39-216ENST00000490193 FUBP3Q96I24 572 aaKnown RBP eCLIP8.81□□□□□ -1
USP39-216ENST00000490193 CDK5RAP3Q96JB5 506 aa8.81□□□□□ -1
USP39-216ENST00000490193 ZSCAN31Q96LW9 406 aaPredicted RBP8.81□□□□□ -1
USP39-216ENST00000490193 AK8Q96MA6 479 aa8.81□□□□□ -1
USP39-216ENST00000490193 PI4K2AQ9BTU6 479 aa8.81□□□□□ -1
USP39-216ENST00000490193 TPSD1Q9BZJ3 242 aa8.81□□□□□ -1
USP39-216ENST00000490193 ARHGAP26Q9UNA1 814 aa8.81□□□□□ -1
USP39-216ENST00000490193 MAGED2Q9UNF1 606 aaPredicted RBP8.81□□□□□ -1
USP39-216ENST00000490193 MSRB2Q9Y3D2 182 aa8.81□□□□□ -1
USP39-216ENST00000490193 WNT6Q9Y6F9 365 aa8.81□□□□□ -1
USP39-216ENST00000490193 SETXQ7Z333 2677 aaKnown RBP8.81□□□□□ -1
USP39-216ENST00000490193 PCDH15Q96QU1 1955 aa8.81□□□□□ -1
USP39-216ENST00000490193 FAM221BA6H8Z2 402 aa8.8□□□□□ -1
USP39-216ENST00000490193 VWA3AA6NCI4 1184 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms