RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 NPR1P16066 1061 aa4.79□□□□□ -1.64
HMGN1-218ENST00000490032 CERS1P27544 350 aa4.79□□□□□ -1.64
HMGN1-218ENST00000490032 RAB27AP51159 221 aa4.79□□□□□ -1.64
HMGN1-218ENST00000490032 PDE6CP51160 858 aa4.79□□□□□ -1.64
HMGN1-218ENST00000490032 AGFG1P52594 562 aaKnown RBP4.79□□□□□ -1.64
HMGN1-218ENST00000490032 TUBA4AP68366 448 aa4.79□□□□□ -1.64
HMGN1-218ENST00000490032 SATB1Q01826 763 aa4.79□□□□□ -1.64
HMGN1-218ENST00000490032 SRSF7Q16629 238 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGN1-218ENST00000490032 ZIK1Q3SY52 487 aaPredicted RBP4.79□□□□□ -1.64
HMGN1-218ENST00000490032 PCID2Q5JVF3 399 aa4.79□□□□□ -1.64
HMGN1-218ENST00000490032 ZNF425Q6IV72 752 aa4.79□□□□□ -1.64
HMGN1-218ENST00000490032 Q6ZWC4 215 aa4.79□□□□□ -1.64
HMGN1-218ENST00000490032 ACO2Q99798 780 aaKnown RBP4.79□□□□□ -1.64
HMGN1-218ENST00000490032 THAP7Q9BT49 309 aaPredicted RBP4.79□□□□□ -1.64
HMGN1-218ENST00000490032 CXorf36Q9H7Y0 433 aa4.79□□□□□ -1.64
HMGN1-218ENST00000490032 STAP2Q9UGK3 403 aa4.79□□□□□ -1.64
HMGN1-218ENST00000490032 ADAMTS5Q9UNA0 930 aa4.79□□□□□ -1.64
HMGN1-218ENST00000490032 hCG_1984214I3L0E3 225 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 NPSP0C0P6 89 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 PRR35P0CG20 571 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 ENGP17813 658 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 DGKEP52429 567 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 EPHB1P54762 984 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 IGBP1P78318 339 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 CYP4F2P78329 520 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 HOXA4Q00056 320 aaPredicted RBP4.78□□□□□ -1.64
HMGN1-218ENST00000490032 PRAMEF17Q5VTA0 474 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 LMBRD2Q68DH5 695 aaPredicted RBP4.78□□□□□ -1.64
HMGN1-218ENST00000490032 EPM2AIP1Q7L775 607 aaPredicted RBP4.78□□□□□ -1.64
HMGN1-218ENST00000490032 NEK8Q86SG6 692 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 DAAM2Q86T65 1068 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 ZNF280BQ86YH2 543 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 TPH2Q8IWU9 490 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 LRRC71Q8N4P6 559 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 DNAJC5GQ8N7S2 189 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 PPP1R35Q8TAP8 253 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 R3HDM4Q96D70 268 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 MRPS17Q9Y2R5 130 aaKnown RBP4.78□□□□□ -1.64
HMGN1-218ENST00000490032 FER1L4A9Z1Z3 1794 aa4.78□□□□□ -1.64
HMGN1-218ENST00000490032 MYO1CO00159 1063 aa4.77□□□□□ -1.65
HMGN1-218ENST00000490032 ADAMTS3O15072 1205 aa4.77□□□□□ -1.65
HMGN1-218ENST00000490032 KCNA3P22001 575 aa4.77□□□□□ -1.65
HMGN1-218ENST00000490032 EPHB2P29323 1055 aa4.77□□□□□ -1.65
HMGN1-218ENST00000490032 PDE1AP54750 535 aa4.77□□□□□ -1.65
HMGN1-218ENST00000490032 GPSM2P81274 684 aa4.77□□□□□ -1.65
HMGN1-218ENST00000490032 MGAT5BQ3V5L5 792 aa4.77□□□□□ -1.65
HMGN1-218ENST00000490032 ANO6Q4KMQ2 910 aa4.77□□□□□ -1.65
HMGN1-218ENST00000490032 MTX3Q5HYI7 312 aa4.77□□□□□ -1.65
HMGN1-218ENST00000490032 MTHFD1LQ6UB35 978 aa4.77□□□□□ -1.65
HMGN1-218ENST00000490032 ZNF783Q6ZMS7 281 aa4.77□□□□□ -1.65
HMGN1-218ENST00000490032 SLC15A3Q8IY34 581 aa4.77□□□□□ -1.65
HMGN1-218ENST00000490032 FAM177A1Q8N128 213 aaPredicted RBP4.77□□□□□ -1.65
HMGN1-218ENST00000490032 NT5C1BQ96P26 610 aa4.77□□□□□ -1.65
HMGN1-218ENST00000490032 ZMAT3Q9HA38 289 aaKnown RBP4.77□□□□□ -1.65
HMGN1-218ENST00000490032 ANLNQ9NQW6 1124 aa4.77□□□□□ -1.65
HMGN1-218ENST00000490032 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.77□□□□□ -1.65
HMGN1-218ENST00000490032 A0A1W2PPL8 197 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 PRRT4C9JH25 899 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 H7C1Q1 480 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 BTN3A1O00481 513 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 TUSC2O75896 110 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 TUBB4AP04350 444 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 DLDP09622 509 aaKnown RBP4.76□□□□□ -1.65
HMGN1-218ENST00000490032 EN2P19622 333 aaPredicted RBP4.76□□□□□ -1.65
HMGN1-218ENST00000490032 KELP23276 732 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 CTGFP29279 349 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 TPTEP56180 551 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 CTBP1Q13363 440 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 TBC1D25Q3MII6 688 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 MORN5Q5VZ52 161 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 ZNF626Q68DY1 528 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 C11orf87Q6NUJ2 197 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 NAPRTQ6XQN6 538 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 TRIM72Q6ZMU5 477 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 OVCH2Q7RTZ1 564 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 ABRAQ8N0Z2 381 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 SLC15A4Q8N697 577 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 ZBTB34Q8NCN2 500 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 ABHD11Q8NFV4 315 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 OR6B3Q8NGW1 331 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 OSCP1Q8WVF1 389 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 XAGE5Q8WWM1 108 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 LRGUKQ96M69 825 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 MACROD1Q9BQ69 325 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 SMURF2Q9HAU4 748 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 ATP6V0A4Q9HBG4 840 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 BTBD3Q9Y2F9 522 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 CACNA1IQ9P0X4 2223 aa4.76□□□□□ -1.65
HMGN1-218ENST00000490032 SMIM22K7EJ46 135 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 PPP6CO00743 305 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 PHGDHO43175 533 aaKnown RBP4.75□□□□□ -1.65
HMGN1-218ENST00000490032 PRKCBP05771 671 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 ADORA2AP29274 412 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 KRT17Q04695 432 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 CYP1B1Q16678 543 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 DEPDC1Q5TB30 811 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 NPNTQ6UXI9 565 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 CATSPERGQ6ZRH7 1159 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 CHSY1Q86X52 802 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 IZUMO1Q8IYV9 350 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms