RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 DUSP16Q9BY84 665 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 PACSIN2Q9UNF0 486 aaPredicted RBP22.85■■□□□ 1.25
SMC4-221ENST00000489573 E5RJQ4 531 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 GOLGA8SH3BPF8 625 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 OAZ2O95190 189 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 FGBP02675 491 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 FAM200BP0CF97 657 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 NPR3P17342 541 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 TCP1P17987 556 aaKnown RBP22.84■■□□□ 1.25
SMC4-221ENST00000489573 PBX3P40426 434 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 RPS6KA1Q15418 735 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 PTPROQ16827 1216 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 PPP1R15BQ5SWA1 713 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 FAM171BQ6P995 826 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 C16orf59Q7L2K0 433 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 TMCO2Q7Z6W1 182 aaPredicted RBP22.84■■□□□ 1.25
SMC4-221ENST00000489573 FAM35AQ86V20 835 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 CMTR2Q8IYT2 770 aaKnown RBP22.84■■□□□ 1.25
SMC4-221ENST00000489573 PKMYT1Q99640 499 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 GPR62Q9BZJ7 368 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 CYLDQ9NQC7 956 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 ALG6Q9Y672 507 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 MKI67P46013 3256 aaKnown RBP22.84■■□□□ 1.25
SMC4-221ENST00000489573 NT5C1B-RDH14C9J2C7 533 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 MYO1FO00160 1098 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 XPO1O14980 1071 aaKnown RBP22.84■■□□□ 1.25
SMC4-221ENST00000489573 GJB6O95452 261 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 PLA2G4AP47712 749 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 ALDH7A1P49419 539 aaKnown RBP22.84■■□□□ 1.25
SMC4-221ENST00000489573 MAPRE1Q15691 268 aaKnown RBP22.84■■□□□ 1.25
SMC4-221ENST00000489573 FAM171A1Q5VUB5 890 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 DCUN1D2Q6PH85 259 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 TMEM110Q86TL2 294 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 UBE2Q2Q8WVN8 375 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 MYLPFQ96A32 169 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 MCRS1Q96EZ8 462 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 HSFY1Q96LI6 401 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 MCEEQ96PE7 176 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 OSBPL9Q96SU4 736 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 TRIM7Q9C029 511 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 KRT82Q9NSB4 513 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 LCMT1Q9UIC8 334 aa22.84■■□□□ 1.25
SMC4-221ENST00000489573 TMEM191CA6NGB0 347 aa22.83■■□□□ 1.25
SMC4-221ENST00000489573 SIGLEC16A6NMB1 481 aa22.83■■□□□ 1.25
SMC4-221ENST00000489573 ZBBXA8MT70 800 aa22.83■■□□□ 1.25
SMC4-221ENST00000489573 COMTP21964 271 aa22.83■■□□□ 1.25
SMC4-221ENST00000489573 FGFR3P22607 806 aa22.83■■□□□ 1.25
SMC4-221ENST00000489573 VARS2Q5ST30 1063 aaKnown RBP22.83■■□□□ 1.25
SMC4-221ENST00000489573 ZNF365Q70YC5 407 aa22.83■■□□□ 1.25
SMC4-221ENST00000489573 TMEM173Q86WV6 379 aaPredicted RBP22.83■■□□□ 1.25
SMC4-221ENST00000489573 HES6Q96HZ4 224 aa22.83■■□□□ 1.25
SMC4-221ENST00000489573 TMEM209Q96SK2 561 aa22.83■■□□□ 1.25
SMC4-221ENST00000489573 HTATIP2Q9BUP3 242 aa22.83■■□□□ 1.25
SMC4-221ENST00000489573 SRGAP2O75044 1071 aa22.82■■□□□ 1.24
SMC4-221ENST00000489573 ACADSBP45954 432 aa22.82■■□□□ 1.24
SMC4-221ENST00000489573 RPL34P49207 117 aaKnown RBP22.82■■□□□ 1.24
SMC4-221ENST00000489573 DNA2P51530 1060 aa22.82■■□□□ 1.24
SMC4-221ENST00000489573 RPL7AP62424 266 aaKnown RBP22.82■■□□□ 1.24
SMC4-221ENST00000489573 BTG3Q14201 252 aaPredicted RBP22.82■■□□□ 1.24
SMC4-221ENST00000489573 WHAMMP3Q1A5X7 153 aa22.82■■□□□ 1.24
SMC4-221ENST00000489573 SPOUT1Q5T280 376 aaKnown RBP22.82■■□□□ 1.24
SMC4-221ENST00000489573 OR6B2Q6IFH4 312 aa22.82■■□□□ 1.24
SMC4-221ENST00000489573 PSRC1Q6PGN9 363 aaPredicted RBP22.82■■□□□ 1.24
SMC4-221ENST00000489573 CLEC20AQ6ZU45 233 aa22.82■■□□□ 1.24
SMC4-221ENST00000489573 FAM183BPQ6ZVS7 135 aa22.82■■□□□ 1.24
SMC4-221ENST00000489573 BCL7CQ8WUZ0 217 aaPredicted RBP22.82■■□□□ 1.24
SMC4-221ENST00000489573 SMARCD1Q96GM5 515 aa22.82■■□□□ 1.24
SMC4-221ENST00000489573 METTL5Q9NRN9 209 aaKnown RBP22.82■■□□□ 1.24
SMC4-221ENST00000489573 IP6K2Q9UHH9 426 aa22.82■■□□□ 1.24
SMC4-221ENST00000489573 PIK3R2O00459 728 aa22.81■■□□□ 1.24
SMC4-221ENST00000489573 SPOPO43791 374 aa22.81■■□□□ 1.24
SMC4-221ENST00000489573 AP1G2O75843 785 aa22.81■■□□□ 1.24
SMC4-221ENST00000489573 PROSCO94903 275 aa22.81■■□□□ 1.24
SMC4-221ENST00000489573 KRT3P12035 628 aa22.81■■□□□ 1.24
SMC4-221ENST00000489573 FAM102AQ5T9C2 384 aaPredicted RBP22.81■■□□□ 1.24
SMC4-221ENST00000489573 ZNF280DQ6N043 979 aa22.81■■□□□ 1.24
SMC4-221ENST00000489573 PIGZQ86VD9 579 aa22.81■■□□□ 1.24
SMC4-221ENST00000489573 CEP57Q86XR8 500 aa22.81■■□□□ 1.24
SMC4-221ENST00000489573 ZDHHC17Q8IUH5 632 aa22.81■■□□□ 1.24
SMC4-221ENST00000489573 PSMB7Q99436 277 aa22.81■■□□□ 1.24
SMC4-221ENST00000489573 ZCWPW1Q9H0M4 648 aa22.81■■□□□ 1.24
SMC4-221ENST00000489573 TMLHEQ9NVH6 421 aa22.81■■□□□ 1.24
SMC4-221ENST00000489573 MIF4GDA9UHW6 222 aaKnown RBP22.8■■□□□ 1.24
SMC4-221ENST00000489573 MAN1A1P33908 653 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 SLC1A1P43005 524 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 MRPL58Q14197 206 aaKnown RBP22.8■■□□□ 1.24
SMC4-221ENST00000489573 LRRTM3Q86VH5 581 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 DCP1BQ8IZD4 617 aaKnown RBP22.8■■□□□ 1.24
SMC4-221ENST00000489573 ZNF558Q96NG5 402 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 YME1L1Q96TA2 773 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 CARNS1A5YM72 827 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 GABBR2O75899 941 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 BEST1O76090 585 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 SLU7O95391 586 aaKnown RBP22.8■■□□□ 1.24
SMC4-221ENST00000489573 LAG3P18627 525 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 EPHB4P54760 987 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 MAP3K7CLP57077 242 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 CTXN3Q4LDR2 81 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 TMEM240Q5SV17 173 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 KCNT2Q6UVM3 1135 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms