RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 HOXD11P31277 338 aaPredicted RBP11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 GTF2H1P32780 548 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 KLK7P49862 253 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 STARD6P59095 220 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 PRKCQQ04759 706 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 TEAD2Q15562 447 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 TAF12Q16514 161 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 ZACNQ401N2 412 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 TCERG1LQ5VWI1 586 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 TANGO2Q6ICL3 276 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 SV2AQ7L0J3 742 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 TRAPPC11Q7Z392 1133 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 LRRTM3Q86VH5 581 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 CREBRFQ8IUR6 639 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 SHKBP1Q8TBC3 707 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 SEMA4DQ92854 862 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 E2F7Q96AV8 911 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 MRFAP1L1Q96HT8 127 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 SLITRK6Q9H5Y7 841 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 TRPV4Q9HBA0 871 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 TMEM8AQ9HCN3 771 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 ABCB6Q9NP58 842 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 SIX2Q9NPC8 291 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 ABI2Q9NYB9 513 aaPredicted RBP11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 A0A1W2PRU2 124 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 GTPBP10A4D1E9 387 aaKnown RBP11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 EPHB6O15197 1021 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 PI15O43692 258 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 SOAT2O75908 522 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 GJA1P17302 382 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 ATF6P18850 670 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 MSNP26038 577 aaKnown RBP11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 CDC25CP30307 473 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 MXI1P50539 228 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 AP3M2P53677 418 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 APBA1Q02410 837 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 MLF2Q15773 248 aaPredicted RBP11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 SOWAHAQ2M3V2 549 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 SLC44A4Q53GD3 710 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 ARHGAP15Q53QZ3 475 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 INTS6LQ5JSJ4 861 aaKnown RBP11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 POTEHQ6S545 545 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 LIMS2Q7Z4I7 341 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 VSTM4Q8IW00 320 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 CCDC105Q8IYK2 499 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 ZSCAN18Q8TBC5 510 aaPredicted RBP11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 TAS1R2Q8TE23 839 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 DEPDC1BQ8WUY9 529 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 DNASE1L2Q92874 299 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 ZSWIM3Q96MP5 696 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 GCNAQ96QF7 691 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 LPIN3Q9BQK8 851 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 TRMT61BQ9BVS5 477 aaKnown RBP11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 PLA2G2FQ9BZM2 168 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 TRIM5Q9C035 493 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 TTYH3Q9C0H2 523 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 ATXN3LQ9H3M9 355 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 ZMYM5Q9UJ78 669 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 SIT1Q9Y3P8 196 aa11.26□□□□□ -0.61
SCAMP4-208ENST00000489554 A0A1W2PQC6 194 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 KANSL1LA0AUZ9 987 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 NRG2O14511 850 aaPredicted RBP11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 P4HA2O15460 535 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 CBFA2T2O43439 604 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 NOL4O94818 638 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 STAU1O95793 577 aaKnown RBP11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 CST3P01034 146 aaPredicted RBP11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 FAM163BP0C2L3 166 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 PSMC3P17980 439 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 SLC9A1P19634 815 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 WARSP23381 471 aaKnown RBP11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 ACAT1P24752 427 aaKnown RBP11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 PON1P27169 355 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 GABRR2P28476 465 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 CDC25BP30305 580 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 ATICP31939 592 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 RPL10AP62906 217 aaKnown RBP11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 PLCB2Q00722 1185 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 UBXN1Q04323 297 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 TBX2Q13207 712 aaPredicted RBP11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 TRPC3Q13507 836 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 SYCP1Q15431 976 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 MAPRE1Q15691 268 aaKnown RBP11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 CFAP221Q4G0U5 840 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 KRT39Q6A163 491 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 GAREM2Q75VX8 874 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 OSTM1Q86WC4 334 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 SPATA2LQ8IUW3 424 aaPredicted RBP11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 DTWD2Q8NBA8 298 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 ANKRD20A12PQ8NF67 263 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 PJA1Q8NG27 643 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 ATOH1Q92858 354 aaPredicted RBP11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 IRF7Q92985 503 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 ELMO3Q96BJ8 720 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 FUBP3Q96I24 572 aaKnown RBP eCLIP11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 MMS19Q96T76 1030 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 PKMYT1Q99640 499 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 PI4K2AQ9BTU6 479 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 DDX23Q9BUQ8 820 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms