RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 UXTQ9UBK9 157 aaPredicted RBP26.66■■□□□ 1.86
HMGN1-217ENST00000489072 PCDHA5Q9Y5H7 936 aa26.66■■□□□ 1.86
HMGN1-217ENST00000489072 PATJQ8NI35 1801 aa26.66■■□□□ 1.86
HMGN1-217ENST00000489072 CLSTN1O94985 981 aa26.65■■□□□ 1.86
HMGN1-217ENST00000489072 RPL13P26373 211 aaKnown RBP26.65■■□□□ 1.86
HMGN1-217ENST00000489072 PRCPP42785 496 aa26.65■■□□□ 1.86
HMGN1-217ENST00000489072 EDRF1Q3B7T1 1238 aa26.65■■□□□ 1.86
HMGN1-217ENST00000489072 ZNF852Q6ZMS4 543 aa26.65■■□□□ 1.86
HMGN1-217ENST00000489072 INTS8Q75QN2 995 aaKnown RBP26.65■■□□□ 1.86
HMGN1-217ENST00000489072 MRPS31Q92665 395 aaKnown RBP26.65■■□□□ 1.86
HMGN1-217ENST00000489072 ZFYVE19Q96K21 471 aa26.65■■□□□ 1.86
HMGN1-217ENST00000489072 SPATA17Q96L03 361 aa26.65■■□□□ 1.86
HMGN1-217ENST00000489072 TIGD1Q96MW7 591 aa26.65■■□□□ 1.86
HMGN1-217ENST00000489072 GSDMAQ96QA5 445 aa26.65■■□□□ 1.86
HMGN1-217ENST00000489072 TMEM30AQ9NV96 361 aa26.65■■□□□ 1.86
HMGN1-217ENST00000489072 RMND1Q9NWS8 449 aa26.65■■□□□ 1.86
HMGN1-217ENST00000489072 ZMYM5Q9UJ78 669 aa26.65■■□□□ 1.86
HMGN1-217ENST00000489072 ASS1P00966 412 aaKnown RBP26.64■■□□□ 1.86
HMGN1-217ENST00000489072 HLA-DRAP01903 254 aa26.64■■□□□ 1.86
HMGN1-217ENST00000489072 DDX6P26196 483 aaKnown RBP eCLIP26.64■■□□□ 1.861e-5■■■□□ 17.8
HMGN1-217ENST00000489072 PSMC2P35998 433 aaKnown RBP26.64■■□□□ 1.86
HMGN1-217ENST00000489072 GRIK1P39086 918 aa26.64■■□□□ 1.86
HMGN1-217ENST00000489072 CACNA2D1P54289 1103 aa26.64■■□□□ 1.86
HMGN1-217ENST00000489072 PPP3CAQ08209 521 aa26.64■■□□□ 1.86
HMGN1-217ENST00000489072 SGSM1Q2NKQ1 1148 aa26.64■■□□□ 1.86
HMGN1-217ENST00000489072 ZNF658Q5TYW1 1059 aaPredicted RBP26.64■■□□□ 1.86
HMGN1-217ENST00000489072 SPOPLQ6IQ16 392 aa26.64■■□□□ 1.86
HMGN1-217ENST00000489072 MON1AQ86VX9 555 aa26.64■■□□□ 1.86
HMGN1-217ENST00000489072 ZNF687Q8N1G0 1237 aa26.64■■□□□ 1.86
HMGN1-217ENST00000489072 B3GALNT2Q8NCR0 500 aa26.64■■□□□ 1.86
HMGN1-217ENST00000489072 EEF2KMTQ96G04 330 aa26.64■■□□□ 1.86
HMGN1-217ENST00000489072 B3GNT5Q9BYG0 378 aa26.64■■□□□ 1.86
HMGN1-217ENST00000489072 ZNF518BQ9C0D4 1074 aa26.64■■□□□ 1.86
HMGN1-217ENST00000489072 CCL26Q9Y258 94 aa26.64■■□□□ 1.86
HMGN1-217ENST00000489072 PIAS3Q9Y6X2 628 aa26.64■■□□□ 1.86
HMGN1-217ENST00000489072 WDR87Q6ZQQ6 2873 aa26.63■■□□□ 1.85
HMGN1-217ENST00000489072 CLDN5O00501 218 aa26.63■■□□□ 1.85
HMGN1-217ENST00000489072 PIK3CAP42336 1068 aa26.63■■□□□ 1.85
HMGN1-217ENST00000489072 GCLMP48507 274 aa26.63■■□□□ 1.85
HMGN1-217ENST00000489072 USP46P62068 366 aa26.63■■□□□ 1.85
HMGN1-217ENST00000489072 FZD5Q13467 585 aa26.63■■□□□ 1.85
HMGN1-217ENST00000489072 COBLL1Q53SF7 1204 aa26.63■■□□□ 1.85
HMGN1-217ENST00000489072 CELF5Q8N6W0 485 aaKnown RBP26.63■■□□□ 1.85
HMGN1-217ENST00000489072 BPIFB1Q8TDL5 484 aa26.63■■□□□ 1.85
HMGN1-217ENST00000489072 TAF4BQ92750 862 aa26.63■■□□□ 1.85
HMGN1-217ENST00000489072 USP13Q92995 863 aaPredicted RBP26.63■■□□□ 1.85
HMGN1-217ENST00000489072 F8VP50 259 aa26.62■■□□□ 1.85
HMGN1-217ENST00000489072 MAN2B1O00754 1011 aa26.62■■□□□ 1.85
HMGN1-217ENST00000489072 GADD45BO75293 160 aaPredicted RBP26.62■■□□□ 1.85
HMGN1-217ENST00000489072 SMC2O95347 1197 aa26.62■■□□□ 1.85
HMGN1-217ENST00000489072 KRT13P13646 458 aa26.62■■□□□ 1.85
HMGN1-217ENST00000489072 AVPR1AP37288 418 aa26.62■■□□□ 1.85
HMGN1-217ENST00000489072 MCCD1P59942 119 aaPredicted RBP26.62■■□□□ 1.85
HMGN1-217ENST00000489072 ARHGAP29Q52LW3 1261 aa26.62■■□□□ 1.85
HMGN1-217ENST00000489072 RIN3Q8TB24 985 aa26.62■■□□□ 1.85
HMGN1-217ENST00000489072 SMARCE1Q969G3 411 aa26.62■■□□□ 1.85
HMGN1-217ENST00000489072 CLDN23Q96B33 292 aa26.62■■□□□ 1.85
HMGN1-217ENST00000489072 C8orf48Q96LL4 319 aa26.62■■□□□ 1.85
HMGN1-217ENST00000489072 NELL2Q99435 816 aa26.62■■□□□ 1.85
HMGN1-217ENST00000489072 BCO2Q9BYV7 579 aa26.62■■□□□ 1.85
HMGN1-217ENST00000489072 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.62■■□□□ 1.854e-17■■■■■ 149.1
HMGN1-217ENST00000489072 CIZ1Q9ULV3 898 aaPredicted RBP26.62■■□□□ 1.85
HMGN1-217ENST00000489072 RIF1Q5UIP0 2472 aaKnown RBP26.61■■□□□ 1.85
HMGN1-217ENST00000489072 SOBPA7XYQ1 873 aa26.61■■□□□ 1.85
HMGN1-217ENST00000489072 TRIM66O15016 1216 aa26.61■■□□□ 1.85
HMGN1-217ENST00000489072 ANXA13P27216 316 aa26.61■■□□□ 1.85
HMGN1-217ENST00000489072 NBL1P41271 181 aa26.61■■□□□ 1.85
HMGN1-217ENST00000489072 ASPAP45381 313 aa26.61■■□□□ 1.85
HMGN1-217ENST00000489072 SOX9P48436 509 aa26.61■■□□□ 1.85
HMGN1-217ENST00000489072 ENPEPQ07075 957 aa26.61■■□□□ 1.85
HMGN1-217ENST00000489072 C1orf210Q8IVY1 113 aa26.61■■□□□ 1.85
HMGN1-217ENST00000489072 CSGALNACT1Q8TDX6 532 aa26.61■■□□□ 1.85
HMGN1-217ENST00000489072 TAS1R2Q8TE23 839 aa26.61■■□□□ 1.85
HMGN1-217ENST00000489072 CEP295NLQ96MC4 621 aa26.61■■□□□ 1.85
HMGN1-217ENST00000489072 SLC22A12Q96S37 553 aa26.61■■□□□ 1.85
HMGN1-217ENST00000489072 MMRN2Q9H8L6 949 aa26.61■■□□□ 1.85
HMGN1-217ENST00000489072 HMGXB4Q9UGU5 601 aa26.61■■□□□ 1.85
HMGN1-217ENST00000489072 NDRG2Q9UN36 371 aaKnown RBP26.61■■□□□ 1.85
HMGN1-217ENST00000489072 MRPS17Q9Y2R5 130 aaKnown RBP26.61■■□□□ 1.85
HMGN1-217ENST00000489072 P4HA1P13674 534 aa26.6■■□□□ 1.85
HMGN1-217ENST00000489072 PMS1P54277 932 aaKnown RBP26.6■■□□□ 1.85
HMGN1-217ENST00000489072 DENND5BQ6ZUT9 1274 aa26.6■■□□□ 1.85
HMGN1-217ENST00000489072 PAQR9Q6ZVX9 377 aa26.6■■□□□ 1.85
HMGN1-217ENST00000489072 FRMD5Q7Z6J6 570 aa26.6■■□□□ 1.85
HMGN1-217ENST00000489072 TTC8Q8TAM2 541 aa26.6■■□□□ 1.85
HMGN1-217ENST00000489072 FAM3CQ92520 227 aa26.6■■□□□ 1.85
HMGN1-217ENST00000489072 CYP2S1Q96SQ9 504 aa26.6■■□□□ 1.85
HMGN1-217ENST00000489072 TTLL2Q9BWV7 592 aa26.6■■□□□ 1.85
HMGN1-217ENST00000489072 ELOVL4Q9GZR5 314 aa26.6■■□□□ 1.85
HMGN1-217ENST00000489072 APOBEC3GQ9HC16 384 aaKnown RBP26.6■■□□□ 1.85
HMGN1-217ENST00000489072 TRPC7Q9HCX4 862 aa26.6■■□□□ 1.85
HMGN1-217ENST00000489072 TDP1Q9NUW8 608 aa26.6■■□□□ 1.85
HMGN1-217ENST00000489072 GTSE1Q9NYZ3 720 aa26.6■■□□□ 1.85
HMGN1-217ENST00000489072 HELZP42694 1942 aaKnown RBP26.59■■□□□ 1.85
HMGN1-217ENST00000489072 MYH10P35580 1976 aa26.59■■□□□ 1.85
HMGN1-217ENST00000489072 PROB1E7EW31 1015 aa26.59■■□□□ 1.85
HMGN1-217ENST00000489072 CCNE1P24864 410 aa26.59■■□□□ 1.85
HMGN1-217ENST00000489072 MLLT6P55198 1093 aaPredicted RBP26.59■■□□□ 1.85
HMGN1-217ENST00000489072 TNK2Q07912 1038 aa26.59■■□□□ 1.85
HMGN1-217ENST00000489072 ORC1Q13415 861 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms