RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 TCHHQ07283 1943 aa11.92□□□□□ -0.5
ARHGEF39-204ENST00000488918 SPTBN5Q9NRC6 3674 aaKnown RBP11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 TRIM49BA6NDI0 452 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 SOBPA7XYQ1 873 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 F8VP50 259 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 HCRTO43612 131 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 RTN3O95197 1032 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 VNN1O95497 513 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 PDGFBP01127 241 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 USP17L7P0C7H9 530 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 VIPR2P41587 438 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 NDST1P52848 882 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 AMPD2Q01433 879 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 ARHGAP29Q52LW3 1261 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 C1orf228Q6PIY5 440 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 TPRG1Q6ZUI0 275 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 GAREM2Q75VX8 874 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 LIMS2Q7Z4I7 341 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 FRMD5Q7Z6J6 570 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 FILIP1Q7Z7B0 1213 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 MFSD6LQ8IWD5 586 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 CMTM8Q8IZV2 173 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 TAS1R2Q8TE23 839 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 TRMT2BQ96GJ1 504 aaKnown RBP11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 HEXIM2Q96MH2 286 aaKnown RBP11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 ZSWIM3Q96MP5 696 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 IPO9Q96P70 1041 aaKnown RBP11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 NELL2Q99435 816 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 RPP25Q9BUL9 199 aaKnown RBP11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 BCO2Q9BYV7 579 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 NUP62CLQ9H1M0 184 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 DPEP3Q9H4B8 488 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 KIF9Q9HAQ2 790 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 TRPV4Q9HBA0 871 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 DMAP1Q9NPF5 467 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 CRTAC1Q9NQ79 661 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 OBP2AQ9NY56 170 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 KIAA1468Q9P260 1216 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 NCOR1O75376 2440 aa11.91□□□□□ -0.5
ARHGEF39-204ENST00000488918 KANSL1LA0AUZ9 987 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 AP1G2O75843 785 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 NOL4O94818 638 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 FAM200BP0CF97 657 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 ANK1P16157 1881 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 AOC1P19801 751 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 YWHAQP27348 245 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 ADORA2BP29275 332 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 SCN1AP35498 2009 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 STX17P56962 302 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 PPP3CAQ08209 521 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 MORC3Q14149 939 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 STXBP5Q5T5C0 1151 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 TXNDC8Q6A555 127 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 SCARA3Q6AZY7 606 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 SPOPLQ6IQ16 392 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 PHLDB3Q6NSJ2 640 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 VITQ6UXI7 678 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 DENND4AQ7Z401 1863 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 MON1AQ86VX9 555 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 GPIHBP1Q8IV16 184 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 PDZD8Q8NEN9 1154 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 BPIFB1Q8TDL5 484 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 ATOH1Q92858 354 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 FAXDC2Q96IV6 333 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 C8orf48Q96LL4 319 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 LRRC3Q9BY71 257 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 GZF1Q9H116 711 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 KRT82Q9NSB4 513 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 TDP1Q9NUW8 608 aa11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.9□□□□□ -0.5
ARHGEF39-204ENST00000488918 FAM170BA6NMN3 283 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 CLDN5O00501 218 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 CHADO15335 359 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 HDCP19113 662 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 TBXAS1P24557 533 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 VCPP55072 806 aaKnown RBP11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 NR1H3Q13133 447 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 ORC1Q13415 861 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 PPP2R5DQ14738 602 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 FAM35AQ86V20 835 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 FAM114A1Q8IWE2 563 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 NUP93Q8N1F7 819 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 MLKLQ8NB16 471 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 SLC2A14Q8TDB8 520 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 FBXO32Q969P5 355 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 ELMO3Q96BJ8 720 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 MSANTD3Q96H12 275 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 MYRFLQ96LU7 910 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 NT5C1BQ96P26 610 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 PKMYT1Q99640 499 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 SRRTQ9BXP5 876 aaKnown RBP11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 B3GNT5Q9BYG0 378 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 PLA2G2FQ9BZM2 168 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 ZNF518BQ9C0D4 1074 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 FBXO44Q9H4M3 255 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 FAM124BQ9H5Z6 455 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 C8orf33Q9H7E9 229 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 HEBP1Q9NRV9 189 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 FAM49BQ9NUQ9 324 aa11.89□□□□□ -0.51
ARHGEF39-204ENST00000488918 RAPGEFL1Q9UHV5 662 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms