RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 NCK2O43639 380 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 PEX1O43933 1283 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 ERN1O75460 977 aaKnown RBP3.97□□□□□ -1.77
CD46-215ENST00000488596 THP07101 528 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 PIM1P11309 404 aaPredicted RBP3.97□□□□□ -1.77
CD46-215ENST00000488596 FOLR3P41439 243 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 TOB1P50616 345 aaPredicted RBP3.97□□□□□ -1.77
CD46-215ENST00000488596 CASP5P51878 434 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 SF3B3Q15393 1217 aaKnown RBP3.97□□□□□ -1.77
CD46-215ENST00000488596 FAM160B1Q5W0V3 765 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 LMBRD2Q68DH5 695 aaPredicted RBP3.97□□□□□ -1.77
CD46-215ENST00000488596 KIAA0895LQ68EN5 471 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 TAPT1Q6NXT6 567 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 TAF2Q6P1X5 1199 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 ZDHHC24Q6UX98 284 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 MORC1Q86VD1 984 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 MICU3Q86XE3 530 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 COLGALT2Q8IYK4 626 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 FAM186BQ8IYM0 893 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 RAPGEF4Q8WZA2 1011 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 DDX17Q92841 729 aaKnown RBP3.97□□□□□ -1.77
CD46-215ENST00000488596 NMD3Q96D46 503 aaKnown RBP3.97□□□□□ -1.77
CD46-215ENST00000488596 RIPOR3Q96MK2 946 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 TIMP4Q99727 224 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 HEPHQ9BQS7 1158 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 CNPPD1Q9BV87 410 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 STK31Q9BXU1 1019 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 PCGF6Q9BYE7 350 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 TTYH3Q9C0H2 523 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 BTBD1Q9H0C5 482 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 ZNF700Q9H0M5 742 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 ETAA1Q9NY74 926 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 CTTNBP2NLQ9P2B4 639 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 AFF4Q9UHB7 1163 aaKnown RBP3.97□□□□□ -1.77
CD46-215ENST00000488596 DAAM1Q9Y4D1 1078 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 WDR91A4D1P6 747 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 TRIM43BA6NCK2 446 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 DCLK1O15075 740 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 YY2O15391 372 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 SUN1O94901 812 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 CHEK2O96017 543 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 PARP1P09874 1014 aaKnown RBP3.96□□□□□ -1.78
CD46-215ENST00000488596 ELFN1P0C7U0 828 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 TNFSF4P23510 183 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 STT3AP46977 705 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 KRTAP10-6P60371 365 aaPredicted RBP3.96□□□□□ -1.78
CD46-215ENST00000488596 POU6F2P78424 691 aaPredicted RBP3.96□□□□□ -1.78
CD46-215ENST00000488596 MC2RQ01718 297 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 PIGFQ07326 219 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 RAB32Q13637 225 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 CD300EQ496F6 205 aaPredicted RBP3.96□□□□□ -1.78
CD46-215ENST00000488596 FAM209BQ5JX69 171 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 DCAF12L1Q5VU92 463 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 PPP1R32Q7Z5V6 425 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 CCDC33Q8N5R6 958 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 SAMD3Q8N6K7 520 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 C9orf106Q8NAJ2 232 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 PSD4Q8NDX1 1056 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 OR56A3Q8NH54 315 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 POC1BQ8TC44 478 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 DDB2Q92466 427 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 DPF1Q92782 380 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 TRIM43Q96BQ3 446 aaPredicted RBP3.96□□□□□ -1.78
CD46-215ENST00000488596 SLC46A1Q96NT5 459 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 KRTAP1-5Q9BYS1 174 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 ZNF518BQ9C0D4 1074 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 MS4A7Q9GZW8 240 aaPredicted RBP3.96□□□□□ -1.78
CD46-215ENST00000488596 TBC1D23Q9NUY8 699 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.96□□□□□ -1.78
CD46-215ENST00000488596 RAD54BQ9Y620 910 aa3.96□□□□□ -1.78
CD46-215ENST00000488596 TRGV11A0A075B6L2 103 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 A0A087WWL8 130 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 CCDC195A0A1B0GUA6 201 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 PYCARD-AS1I3L0S3 204 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 TOR1BO14657 336 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 IL18RAPO95256 599 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 KCNA2P16389 499 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 RPL17P18621 184 aaKnown RBP3.95□□□□□ -1.78
CD46-215ENST00000488596 GATA3P23771 443 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 TM4SF4P48230 202 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 ZNF134P52741 427 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 MAPK10P53779 464 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 HTRA4P83105 476 aaPredicted RBP3.95□□□□□ -1.78
CD46-215ENST00000488596 FPGSQ05932 587 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 OS9Q13438 667 aaPredicted RBP3.95□□□□□ -1.78
CD46-215ENST00000488596 DAG1Q14118 895 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 LONRF3Q496Y0 759 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 RRAGBQ5VZM2 374 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 ZNF425Q6IV72 752 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 HIBCHQ6NVY1 386 aaPredicted RBP3.95□□□□□ -1.78
CD46-215ENST00000488596 XRRA1Q6P2D8 792 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 UNC13DQ70J99 1090 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 ZNF280BQ86YH2 543 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 Q8N9P0 234 aaPredicted RBP3.95□□□□□ -1.78
CD46-215ENST00000488596 GJA10Q969M2 543 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 UNKQ9C0B0 810 aaKnown RBP3.95□□□□□ -1.78
CD46-215ENST00000488596 SIK2Q9H0K1 926 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 CHST8Q9H2A9 424 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 AS3MTQ9HBK9 375 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 CPNE5Q9HCH3 593 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms