RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ZNF518BQ9C0D4 1074 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 TMEM63CQ9P1W3 806 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 HMGXB4Q9UGU5 601 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 ZMYM5Q9UJ78 669 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 NUMBLQ9Y6R0 609 aa16■□□□□ 0.15
CXCL12-207ENST00000488591 MYO10Q9HD67 2058 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 F8VP50 259 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 MOSPD3O75425 235 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 LETM1O95202 739 aaPredicted RBP15.99■□□□□ 0.15
CXCL12-207ENST00000488591 HMGA1P17096 107 aaKnown RBP15.99■□□□□ 0.15
CXCL12-207ENST00000488591 ZNF394Q53GI3 561 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 PARM1Q6UWI2 310 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 DENND5BQ6ZUT9 1274 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 GAREM2Q75VX8 874 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 FAM35AQ86V20 835 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 PPM1KQ8N3J5 372 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 SLC44A3Q8N4M1 653 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 SLC2A14Q8TDB8 520 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 RSAD2Q8WXG1 361 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 TMEM176AQ96HP8 235 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 MYRFLQ96LU7 910 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 TWNKQ96RR1 684 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 NAT10Q9H0A0 1025 aaKnown RBP15.99■□□□□ 0.15
CXCL12-207ENST00000488591 FAM49BQ9NUQ9 324 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 NFE2L3Q9Y4A8 694 aa15.99■□□□□ 0.15
CXCL12-207ENST00000488591 KCNJ18B7U540 433 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 ECI2O75521 394 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 AP1G2O75843 785 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 PRKCSHP14314 528 aaPredicted RBP15.98■□□□□ 0.15
CXCL12-207ENST00000488591 DDX6P26196 483 aaKnown RBP eCLIP15.98■□□□□ 0.15
CXCL12-207ENST00000488591 EEF1GP26641 437 aaKnown RBP15.98■□□□□ 0.15
CXCL12-207ENST00000488591 SIGLEC14Q08ET2 396 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 KCNJ12Q14500 433 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 MAN2A1Q16706 1144 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 KLHL40Q2TBA0 621 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 FAM78AQ5JUQ0 283 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 GPR158Q5T848 1215 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 GBP6Q6ZN66 633 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 FUKQ8N0W3 1084 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 C12orf29Q8N999 325 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 LMO3Q8TAP4 145 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 ZSCAN18Q8TBC5 510 aaPredicted RBP15.98■□□□□ 0.15
CXCL12-207ENST00000488591 WHAMMQ8TF30 809 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 MRPS31Q92665 395 aaKnown RBP15.98■□□□□ 0.15
CXCL12-207ENST00000488591 FGF14Q92915 247 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 SMARCD2Q92925 531 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 E2F7Q96AV8 911 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 CYFIP2Q96F07 1278 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 HNRNPABQ99729 332 aaKnown RBP15.98■□□□□ 0.15
CXCL12-207ENST00000488591 ARID3AQ99856 593 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 TUBGCP2Q9BSJ2 902 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 INTS2Q9H0H0 1204 aaKnown RBP15.98■□□□□ 0.15
CXCL12-207ENST00000488591 TASP1Q9H6P5 420 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 IL21Q9HBE4 155 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 ZFP14Q9HCL3 533 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 DMAP1Q9NPF5 467 aaPredicted RBP15.98■□□□□ 0.15
CXCL12-207ENST00000488591 GCNT4Q9P109 453 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 PTPRDP23468 1912 aa15.98■□□□□ 0.15
CXCL12-207ENST00000488591 GTPBP10A4D1E9 387 aaKnown RBP15.97■□□□□ 0.15
CXCL12-207ENST00000488591 SOBPA7XYQ1 873 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 RTN3O95197 1032 aaPredicted RBP15.97■□□□□ 0.15
CXCL12-207ENST00000488591 F11P03951 625 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 TPM2P07951 284 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 FAM200BP0CF97 657 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 CCDC130P13994 396 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 ADORA2BP29275 332 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 TYRO3Q06418 890 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 HSP90AA4PQ58FG1 418 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 TRIM67Q6ZTA4 783 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 PAQR9Q6ZVX9 377 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 NUP93Q8N1F7 819 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 STKLD1Q8NE28 680 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 ST13P5Q8NFI4 369 aaPredicted RBP15.97■□□□□ 0.15
CXCL12-207ENST00000488591 ELSPBP1Q96BH3 223 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 FAM81BQ96LP2 452 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 ZSWIM3Q96MP5 696 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 ASB16Q96NS5 453 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 KXD1Q9BQD3 176 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 KRT82Q9NSB4 513 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 DUSP12Q9UNI6 340 aa15.97■□□□□ 0.15
CXCL12-207ENST00000488591 PES1O00541 588 aaKnown RBP15.96■□□□□ 0.15
CXCL12-207ENST00000488591 DPYSL4O14531 572 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 GPR37L1O60883 481 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 SRFP11831 508 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 PPP3CCP48454 512 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 RAD23BP54727 409 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 CYP4F8P98187 520 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 GCNT1Q02742 428 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 SKOR2Q2VWA4 1001 aaPredicted RBP15.96■□□□□ 0.15
CXCL12-207ENST00000488591 VWA3BQ502W6 1294 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 TCP11X2Q5H9J9 407 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 TMEM31Q5JXX7 168 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 TANGO2Q6ICL3 276 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 RRAGAQ7L523 313 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 SLC4A11Q8NBS3 891 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 KCNK16Q96T55 309 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 CRACR2AQ9BSW2 395 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 NDST4Q9H3R1 872 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 TRPV4Q9HBA0 871 aa15.96■□□□□ 0.15
CXCL12-207ENST00000488591 SAMSN1Q9NSI8 373 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms