RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 KRT39Q6A163 491 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 ARID3BQ8IVW6 561 aaPredicted RBP15.14■□□□□ 0.01
COL9A2-208ENST00000488463 CRYBG2Q8N1P7 616 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 WHAMMQ8TF30 809 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 C8orf48Q96LL4 319 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 TWNKQ96RR1 684 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 DDX23Q9BUQ8 820 aaKnown RBP15.14■□□□□ 0.01
COL9A2-208ENST00000488463 SLC46A2Q9BY10 475 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 ZNF518BQ9C0D4 1074 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 KCNH6Q9H252 994 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 TASP1Q9H6P5 420 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.14■□□□□ 0.01
COL9A2-208ENST00000488463 LMBRD1Q9NUN5 540 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 CA14Q9ULX7 337 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 CACNA1IQ9P0X4 2223 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 CLDN5O00501 218 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 MXI1P50539 228 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 CLCN5P51795 746 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 NDST1P52848 882 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 CYP27A1Q02318 531 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 NHLH1Q02575 133 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 FCHO2Q0JRZ9 810 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 STIM1Q13586 685 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 ASTLQ6HA08 431 aaPredicted RBP15.13■□□□□ 0.01
COL9A2-208ENST00000488463 KLHL10Q6JEL2 608 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 FILIP1Q7Z7B0 1213 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 MFSD6LQ8IWD5 586 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 SCN4BQ8IWT1 228 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 SUGP1Q8IWZ8 645 aaKnown RBP15.13■□□□□ 0.01
COL9A2-208ENST00000488463 FUKQ8N0W3 1084 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 TRIML1Q8N9V2 468 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 NELFBQ8WX92 580 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 CEP295NLQ96MC4 621 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 CEP63Q96MT8 703 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 TTLL2Q9BWV7 592 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 CLSTN2Q9H4D0 955 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 MMRN2Q9H8L6 949 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 ARHGEF3Q9NR81 526 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 FBXL21Q9UKT6 434 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 ZNF292O60281 2723 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 PATJQ8NI35 1801 aa15.13■□□□□ 0.01
COL9A2-208ENST00000488463 HEPACAM2A8MVW5 462 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 F8VP50 259 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 P4HA1P13674 534 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 PSMC3P17980 439 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 AOC1P19801 751 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 STARD6P59095 220 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 ORC1Q13415 861 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 GRM2Q14416 872 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 PHLDB3Q6NSJ2 640 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 FRMD5Q7Z6J6 570 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 ACOT1Q86TX2 421 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 UNC93AQ86WB7 457 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 GPIHBP1Q8IV16 184 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 FBXL13Q8NEE6 735 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 PRSS33Q8NF86 280 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 FAXDC2Q96IV6 333 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 ELOVL4Q9GZR5 314 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 NIF3L1Q9GZT8 377 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 SLITRK6Q9H5Y7 841 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 TBC1D17Q9HA65 648 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 CYP3A43Q9HB55 503 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 TRPV5Q9NQA5 729 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 RAB20Q9NX57 234 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 ARMCX3Q9UH62 379 aaPredicted RBP15.12■□□□□ 0.01
COL9A2-208ENST00000488463 MAGED2Q9UNF1 606 aaPredicted RBP15.12■□□□□ 0.01
COL9A2-208ENST00000488463 CTNND2Q9UQB3 1225 aa15.12■□□□□ 0.01
COL9A2-208ENST00000488463 MYH10P35580 1976 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 SOBPA7XYQ1 873 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 TNFRSF10BO14763 440 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 PMM2O15305 246 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 STX10O60499 249 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 CILPO75339 1184 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 GRIK1P39086 918 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 MARSP56192 900 aaKnown RBP15.11■□□□□ 0.01
COL9A2-208ENST00000488463 PAK1Q13153 545 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 TAF12Q16514 161 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 SLC44A4Q53GD3 710 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 TXNDC8Q6A555 127 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 FAM35AQ86V20 835 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 MON1AQ86VX9 555 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 CMTM8Q8IZV2 173 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 ZNF687Q8N1G0 1237 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 C12orf29Q8N999 325 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 ZMIZ2Q8NF64 920 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 FLCNQ8NFG4 579 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 RIN3Q8TB24 985 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 DEPDC1BQ8WUY9 529 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 DNASE1L2Q92874 299 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 TATDN2Q93075 761 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 E2F7Q96AV8 911 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 TNIP3Q96KP6 325 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 SLC22A12Q96S37 553 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 TRMT61BQ9BVS5 477 aaKnown RBP15.11■□□□□ 0.01
COL9A2-208ENST00000488463 OBP2AQ9NY56 170 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 IL37Q9NZH6 218 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 DLGAP2Q9P1A6 1054 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 UXTQ9UBK9 157 aaPredicted RBP15.11■□□□□ 0.01
COL9A2-208ENST00000488463 CCL26Q9Y258 94 aa15.11■□□□□ 0.01
COL9A2-208ENST00000488463 HELZP42694 1942 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms