RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 PEX2P28328 305 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 UCP3P55916 312 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 SOX10P56693 466 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 RHDQ02161 417 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 GRM3Q14832 879 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 LLGL1Q15334 1064 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 FAM153CQ494X1 144 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 MPP5Q8N3R9 675 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 FKBP10Q96AY3 582 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 APIPQ96GX9 242 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 PBKQ96KB5 322 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 PPP1R9BQ96SB3 815 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 P2RX7Q99572 595 aaKnown RBP5.31□□□□□ -1.56
ITGB1-214ENST00000488427 BTBD1Q9H0C5 482 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 IKZF4Q9H2S9 585 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 TRMT13Q9NUP7 481 aaKnown RBP5.31□□□□□ -1.56
ITGB1-214ENST00000488427 SLC17A6Q9P2U8 582 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 AGAP1Q9UPQ3 857 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 SH2B3Q9UQQ2 575 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 ARHGEF40Q8TER5 1519 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 ABCA10Q8WWZ4 1543 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 POGZQ7Z3K3 1410 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 MBD3L4A6NDZ8 208 aaPredicted RBP5.3□□□□□ -1.56
ITGB1-214ENST00000488427 MBD3L3A6NE82 208 aaPredicted RBP5.3□□□□□ -1.56
ITGB1-214ENST00000488427 MYO1FO00160 1098 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 TOM1O60784 492 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 CAND2O75155 1236 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 URI1O94763 535 aaPredicted RBP5.3□□□□□ -1.56
ITGB1-214ENST00000488427 ZFPL1O95159 310 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 LMNAP02545 664 aaKnown RBP5.3□□□□□ -1.56
ITGB1-214ENST00000488427 PPP3CBP16298 524 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 KRT4P19013 534 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 MPLP40238 635 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 ALDH9A1P49189 494 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 BMPR2Q13873 1038 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 CNGA2Q16280 664 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 SMN1Q16637 294 aaKnown RBP5.3□□□□□ -1.56
ITGB1-214ENST00000488427 APOA5Q6Q788 366 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 GAS2L3Q86XJ1 694 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 SDR16C5Q8N3Y7 309 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 SLC15A4Q8N697 577 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 FAM156AQ8NDB6 213 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 NMD3Q96D46 503 aaKnown RBP5.3□□□□□ -1.56
ITGB1-214ENST00000488427 C22orf23Q9BZE7 217 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 MS4A7Q9GZW8 240 aaPredicted RBP5.3□□□□□ -1.56
ITGB1-214ENST00000488427 SERHLQ9NQF3 203 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 ZNHIT2Q9UHR6 403 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 TLK1Q9UKI8 766 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 CD109Q6YHK3 1445 aa5.3□□□□□ -1.56
ITGB1-214ENST00000488427 CUX1P39880 1505 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 SUPT6HQ7KZ85 1726 aaKnown RBP5.29□□□□□ -1.56
ITGB1-214ENST00000488427 SLC16A3O15427 465 aaKnown RBP5.29□□□□□ -1.56
ITGB1-214ENST00000488427 MAP4K4O95819 1239 aaPredicted RBP5.29□□□□□ -1.56
ITGB1-214ENST00000488427 TTLL1O95922 423 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 KRT18P05783 430 aaKnown RBP5.29□□□□□ -1.56
ITGB1-214ENST00000488427 MYF5P13349 255 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 ZKSCAN1P17029 563 aaPredicted RBP5.29□□□□□ -1.56
ITGB1-214ENST00000488427 GRIA3P42263 894 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 ELLP55199 621 aaPredicted RBP5.29□□□□□ -1.56
ITGB1-214ENST00000488427 ZNF169Q14929 603 aaPredicted RBP5.29□□□□□ -1.56
ITGB1-214ENST00000488427 KIAA0895LQ68EN5 471 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 Q6ZPA2 131 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 SLC15A3Q8IY34 581 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 YAF2Q8IY57 180 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 MYCBPAPQ8TBZ2 947 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 LPIN2Q92539 896 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 SPSB4Q96A44 273 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 LRIG1Q96JA1 1093 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 STRBPQ96SI9 672 aaKnown RBP5.29□□□□□ -1.56
ITGB1-214ENST00000488427 AMBRA1Q9C0C7 1298 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 SMOC2Q9H3U7 446 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 RIOX1Q9H6W3 641 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 PNPLA8Q9NP80 782 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 SACM1LQ9NTJ5 587 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 PTPRGP23470 1445 aa5.29□□□□□ -1.56
ITGB1-214ENST00000488427 ZNF335Q9H4Z2 1342 aaPredicted RBP5.28□□□□□ -1.56
ITGB1-214ENST00000488427 CCDC88BA6NC98 1476 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 FANCAO15360 1455 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 LOC102723971A0A1B0GUV8 181 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 TRIM43BA6NCK2 446 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 ZAR1LA6NP61 321 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 CCP110O43303 1012 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 CHRM2P08172 466 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 PDE6CP51160 858 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 PRKAG1P54619 331 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 SUMO3P55854 103 aaPredicted RBP5.28□□□□□ -1.56
ITGB1-214ENST00000488427 LILRA4P59901 499 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 PRR16Q569H4 304 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 ARHGAP40Q5TG30 622 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 CCSAPQ6IQ19 270 aaPredicted RBP5.28□□□□□ -1.56
ITGB1-214ENST00000488427 ZNF551Q7Z340 670 aaPredicted RBP5.28□□□□□ -1.56
ITGB1-214ENST00000488427 ZNF804AQ7Z570 1209 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 DTX2Q86UW9 622 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 SPARTQ8N0X7 666 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 KRT78Q8N1N4 520 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 FAM109AQ8N4B1 249 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 TRIM43Q96BQ3 446 aaPredicted RBP5.28□□□□□ -1.56
ITGB1-214ENST00000488427 ZG16BQ96DA0 208 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 NT5C1BQ96P26 610 aa5.28□□□□□ -1.56
ITGB1-214ENST00000488427 UNKQ9C0B0 810 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms