RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 ZBTB6Q15916 424 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 CLPPQ16740 277 aaPredicted RBP2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 UPP1Q16831 310 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 ITPRIPL2Q3MIP1 535 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 CYP4A22Q5TCH4 519 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 PMS2CLQ68D20 193 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 TWF2Q6IBS0 349 aaKnown RBP2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 USP17L6PQ6QN14 398 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 NFXL1Q6ZNB6 911 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 CHST3Q7LGC8 479 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 HEATR3Q7Z4Q2 680 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 PDZD8Q8NEN9 1154 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 CADM4Q8NFZ8 388 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 BAHD1Q8TBE0 780 aaPredicted RBP2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 ADAMTS14Q8WXS8 1223 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 RFFLQ8WZ73 363 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 NKD1Q969G9 470 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 MTMR9Q96QG7 549 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 CLSTN3Q9BQT9 956 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 RSRP1Q9BUV0 290 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 CCDC94Q9BW85 323 aaPredicted RBP2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 RAB34Q9BZG1 259 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 NUCKS1Q9H1E3 243 aaKnown RBP2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 ASB7Q9H672 318 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 SEL1LQ9UBV2 794 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 PIN4Q9Y237 131 aaKnown RBP2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 STARD13Q9Y3M8 1113 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 R3HCC1Q9Y3T6 440 aaKnown RBP2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 C2CD2Q9Y426 696 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 DYRK1BQ9Y463 629 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 INSL5Q9Y5Q6 135 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 MYO16Q9Y6X6 1858 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 A0A087WV48 116 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 FAM170BA6NMN3 283 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 H0Y858 1186 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 PDE2AO00408 941 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 GIPC1O14908 333 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 HOXC11O43248 304 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 GREM1O60565 184 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 ZNF217O75362 1048 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 DDHD2O94830 711 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 KIF4AO95239 1232 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 KCNK5O95279 499 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 SYPP08247 313 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 CLTAP09496 248 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 GSPT1P15170 499 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 RPS6KB1P23443 525 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 RPA1P27694 616 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 YWHABP31946 246 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 SOX9P48436 509 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 DGKEP52429 567 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 YARSP54577 528 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 EPHB3P54753 998 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 RPL10AP62906 217 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 CSTF1Q05048 431 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 SEMA3BQ13214 749 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 KIZQ2M2Z5 673 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 PPM1JQ5JR12 505 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 EOGTQ5NDL2 527 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 RNF43Q68DV7 783 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 IQCEQ6IPM2 695 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 C6orf15Q6UXA7 325 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 UNQ6494/PRO21346Q6UXR6 183 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 TPRG1Q6ZUI0 275 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 ANO5Q75V66 913 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 CENPQQ7L2Z9 268 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 DCP1BQ8IZD4 617 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 SCML4Q8N228 414 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 LRRC52Q8N7C0 313 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 GSTCDQ8NEC7 633 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 NUDT8Q8WV74 236 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 FGF13Q92913 245 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 AK8Q96MA6 479 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 CDK5RAP1Q96SZ6 601 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 MRPL4Q9BYD3 311 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 ZCWPW1Q9H0M4 648 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 PDZD7Q9H5P4 517 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 PIDD1Q9HB75 910 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 ASAH2Q9NR71 780 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 ARHGAP28Q9P2N2 729 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 UBQLN1Q9UMX0 589 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 MAPK8IP1Q9UQF2 711 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 ZNF510Q9Y2H8 683 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 PRRC2BQ5JSZ5 2229 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 hCG_2014768A0A024R1R8 64 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 A0A087WZ62 844 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 PPP1R12AO14974 1030 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 EDIL3O43854 480 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 PFKFB2O60825 505 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 CBFA2T3O75081 653 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 N4BP1O75113 896 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 MOSPD3O75425 235 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 TADA2AO75478 443 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 CSH1P0DML2 217 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 CSH2P0DML3 217 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 RARRES1P49788 294 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 CLCN3P51790 818 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 SLC7A9P82251 487 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms