RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 NUGGCQ68CJ6 796 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 IQSEC1Q6DN90 963 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 HIBCHQ6NVY1 386 aaPredicted RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 SLC27A1Q6PCB7 646 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CAPN12Q6ZSI9 719 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ANKRD23Q86SG2 305 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 SIX6OS1Q8N1H7 587 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 APPL2Q8NEU8 664 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 PPP1R14CQ8TAE6 165 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 FNIP1Q8TF40 1166 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TRAPPC12Q8WVT3 735 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 MRRFQ96E11 262 aaKnown RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TSNARE1Q96NA8 513 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CNPY3Q9BT09 278 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 DDX23Q9BUQ8 820 aaKnown RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TRABDQ9H4I3 376 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 EFCC1Q9HA90 598 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 PRDM16Q9HAZ2 1276 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 SPC25Q9HBM1 224 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TXLNGQ9NUQ3 528 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 DDX20Q9UHI6 824 aaKnown RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 XPO7Q9UIA9 1087 aaKnown RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 USP18Q9UMW8 372 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 UMODL1Q5DID0 1318 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TCRBV7S2A1N4TA0A589 114 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 ARHGEF37A1IGU5 675 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 CCT8L1PA6NM43 557 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 H3BRB1 525 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 TULP2O00295 520 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 O00370 1275 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 CNMDO75829 334 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 DCTN3O75935 186 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 ATP5HO75947 161 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 ECM2O94769 699 aaPredicted RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 ERBB2P04626 1255 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 GSTA1P08263 222 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 ZNF286BP0CG31 522 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 KRT10P13645 584 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 EZRP15311 586 aaKnown RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 KDELR1P24390 212 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 GARSP41250 739 aaKnown RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 CTCFP49711 727 aaPredicted RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 HIRAP54198 1017 aaPredicted RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 FKBP1BP68106 108 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 OTUD4Q01804 1114 aaKnown RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 ACTN3Q08043 901 aaPredicted RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 AUHQ13825 339 aaKnown RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 CCDC38Q502W7 563 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 MFSD7Q6UXD7 560 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 SPATA21Q7Z572 469 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 UNC93AQ86WB7 457 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 METTL23Q86XA0 190 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 VSIG1Q86XK7 387 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 CCDC63Q8NA47 563 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 UBA3Q8TBC4 463 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 MDM1Q8TC05 714 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 AFG1LQ8WV93 481 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 CDKL2Q92772 493 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 APBB2Q92870 758 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 CFAP36Q96G28 342 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 CYTH2Q99418 400 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 TBCBQ99426 244 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 FAM118BQ9BPY3 351 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 TUBB6Q9BUF5 446 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 BCO2Q9BYV7 579 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 TXLNGYQ9BZA5 131 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 PHACTR1Q9C0D0 580 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 PDZD7Q9H5P4 517 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 TUT1Q9H6E5 874 aaKnown RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 TXNDC16Q9P2K2 825 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 RBPJLQ9UBG7 517 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 ARL2BPQ9Y2Y0 163 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 NR2E1Q9Y466 385 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 USP15Q9Y4E8 981 aaPredicted RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 SNX9Q9Y5X1 595 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 FER1L6Q2WGJ9 1857 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 IGKV6-21A0A0C4DH24 114 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 SLC15A5A6NIM6 579 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 TCP11X1B4DZS4 312 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 H3BRJ5 948 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 APOC4-APOC2K7ER74 178 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 CAPN9O14815 690 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 B4GALT5O43286 388 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 CILPO75339 1184 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 TCEA3O75764 348 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 FSBPO95073 299 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 TRUB2O95900 331 aaKnown RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 APOC2P02655 101 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 ZBTB48P10074 688 aaPredicted RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 CYP2C9P11712 490 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 CA4P22748 312 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 PCK1P35558 622 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 CHKAP35790 457 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 ZNF143P52747 638 aaPredicted RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 NDST1P52848 882 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 BCAR1P56945 870 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 BST2Q10589 180 aaKnown RBP2.77□□□□□ -1.97
C9orf72-205ENST00000488117 HSDL1Q3SXM5 330 aa2.77□□□□□ -1.97
C9orf72-205ENST00000488117 EFHC1Q5JVL4 640 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms