RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 MUC6Q6W4X9 2439 aa25.28■■□□□ 1.64
RNF38-208ENST00000488058 TRIM49BA6NDI0 452 aa25.27■■□□□ 1.64
RNF38-208ENST00000488058 CLDN5O00501 218 aa25.27■■□□□ 1.64
RNF38-208ENST00000488058 TRIM66O15016 1216 aa25.27■■□□□ 1.64
RNF38-208ENST00000488058 LRRN2O75325 713 aa25.27■■□□□ 1.64
RNF38-208ENST00000488058 ASS1P00966 412 aaKnown RBP25.27■■□□□ 1.64
RNF38-208ENST00000488058 AVPR1AP37288 418 aa25.27■■□□□ 1.64
RNF38-208ENST00000488058 STIM1Q13586 685 aa25.27■■□□□ 1.64
RNF38-208ENST00000488058 COBLL1Q53SF7 1204 aa25.27■■□□□ 1.64
RNF38-208ENST00000488058 ANKRD40Q6AI12 368 aa25.27■■□□□ 1.64
RNF38-208ENST00000488058 ADSSL1Q8N142 457 aa25.27■■□□□ 1.64
RNF38-208ENST00000488058 TAS1R2Q8TE23 839 aa25.27■■□□□ 1.64
RNF38-208ENST00000488058 ATOH1Q92858 354 aaPredicted RBP25.27■■□□□ 1.64
RNF38-208ENST00000488058 TRMT2BQ96GJ1 504 aaKnown RBP25.27■■□□□ 1.64
RNF38-208ENST00000488058 MED10Q9BTT4 135 aa25.27■■□□□ 1.64
RNF38-208ENST00000488058 ZNF518BQ9C0D4 1074 aa25.27■■□□□ 1.64
RNF38-208ENST00000488058 TRPC7Q9HCX4 862 aa25.27■■□□□ 1.64
RNF38-208ENST00000488058 GREB1Q4ZG55 1949 aa25.26■■□□□ 1.63
RNF38-208ENST00000488058 F8VP50 259 aa25.26■■□□□ 1.63
RNF38-208ENST00000488058 PMS1P54277 932 aaKnown RBP25.26■■□□□ 1.63
RNF38-208ENST00000488058 ORC1Q13415 861 aa25.26■■□□□ 1.63
RNF38-208ENST00000488058 TCERG1LQ5VWI1 586 aa25.26■■□□□ 1.63
RNF38-208ENST00000488058 ELOA2Q8IYF1 753 aaPredicted RBP25.26■■□□□ 1.63
RNF38-208ENST00000488058 CMTM8Q8IZV2 173 aa25.26■■□□□ 1.63
RNF38-208ENST00000488058 CSGALNACT1Q8TDX6 532 aa25.26■■□□□ 1.63
RNF38-208ENST00000488058 TNIP3Q96KP6 325 aa25.26■■□□□ 1.63
RNF38-208ENST00000488058 B3GNT5Q9BYG0 378 aa25.26■■□□□ 1.63
RNF38-208ENST00000488058 ELOVL4Q9GZR5 314 aa25.26■■□□□ 1.63
RNF38-208ENST00000488058 TMEM8AQ9HCN3 771 aa25.26■■□□□ 1.63
RNF38-208ENST00000488058 FAM170BA6NMN3 283 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 BIN1O00499 593 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 PSMA7O14818 248 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 TADA3O75528 432 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 DDX6P26196 483 aaKnown RBP eCLIP25.25■■□□□ 1.63
RNF38-208ENST00000488058 NOP14P78316 857 aaKnown RBP25.25■■□□□ 1.63
RNF38-208ENST00000488058 ENPEPQ07075 957 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 DCAF17Q5H9S7 520 aaPredicted RBP25.25■■□□□ 1.63
RNF38-208ENST00000488058 DENND5BQ6ZUT9 1274 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 ACOT1Q86TX2 421 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 CCDC150Q8NCX0 1101 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 BPIFB1Q8TDL5 484 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 ZFYVE19Q96K21 471 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 SPATA17Q96L03 361 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 MYRFLQ96LU7 910 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 DDX23Q9BUQ8 820 aaKnown RBP25.25■■□□□ 1.63
RNF38-208ENST00000488058 IRF2BPLQ9H1B7 796 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 LTB4R2Q9NPC1 389 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 ZMYM5Q9UJ78 669 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 MTF2Q9Y483 593 aaPredicted RBP25.25■■□□□ 1.63
RNF38-208ENST00000488058 ATP8B3O60423 1300 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 COL4A2P08572 1712 aa25.25■■□□□ 1.63
RNF38-208ENST00000488058 CHADO15335 359 aa25.24■■□□□ 1.63
RNF38-208ENST00000488058 ASPAP45381 313 aa25.24■■□□□ 1.63
RNF38-208ENST00000488058 MXI1P50539 228 aa25.24■■□□□ 1.63
RNF38-208ENST00000488058 NDST1P52848 882 aa25.24■■□□□ 1.63
RNF38-208ENST00000488058 CACNA2D1P54289 1103 aa25.24■■□□□ 1.63
RNF38-208ENST00000488058 FKBP3Q00688 224 aaKnown RBP25.24■■□□□ 1.63
RNF38-208ENST00000488058 IFRD2Q12894 506 aaPredicted RBP25.24■■□□□ 1.63
RNF38-208ENST00000488058 KRT39Q6A163 491 aa25.24■■□□□ 1.63
RNF38-208ENST00000488058 KLHL10Q6JEL2 608 aa25.24■■□□□ 1.63
RNF38-208ENST00000488058 ZNF852Q6ZMS4 543 aa25.24■■□□□ 1.63
RNF38-208ENST00000488058 MON1AQ86VX9 555 aa25.24■■□□□ 1.63
RNF38-208ENST00000488058 CELF5Q8N6W0 485 aaKnown RBP25.24■■□□□ 1.63
RNF38-208ENST00000488058 TTC16Q8NEE8 873 aa25.24■■□□□ 1.63
RNF38-208ENST00000488058 LRRC3BQ96PB8 259 aa25.24■■□□□ 1.63
RNF38-208ENST00000488058 OBP2AQ9NY56 170 aa25.24■■□□□ 1.63
RNF38-208ENST00000488058 HMGXB4Q9UGU5 601 aa25.24■■□□□ 1.63
RNF38-208ENST00000488058 PIAS3Q9Y6X2 628 aa25.24■■□□□ 1.63
RNF38-208ENST00000488058 STX10O60499 249 aa25.23■■□□□ 1.63
RNF38-208ENST00000488058 CCNE1P24864 410 aa25.23■■□□□ 1.63
RNF38-208ENST00000488058 WEE1P30291 646 aa25.23■■□□□ 1.63
RNF38-208ENST00000488058 GTF2H1P32780 548 aa25.23■■□□□ 1.63
RNF38-208ENST00000488058 USP46P62068 366 aa25.23■■□□□ 1.63
RNF38-208ENST00000488058 LRRC63Q05C16 580 aa25.23■■□□□ 1.63
RNF38-208ENST00000488058 FCHO2Q0JRZ9 810 aa25.23■■□□□ 1.63
RNF38-208ENST00000488058 ARHGAP29Q52LW3 1261 aa25.23■■□□□ 1.63
RNF38-208ENST00000488058 FAM35AQ86V20 835 aa25.23■■□□□ 1.63
RNF38-208ENST00000488058 TTC8Q8TAM2 541 aa25.23■■□□□ 1.63
RNF38-208ENST00000488058 C8orf48Q96LL4 319 aa25.23■■□□□ 1.63
RNF38-208ENST00000488058 PHOX2BQ99453 314 aa25.23■■□□□ 1.63
RNF38-208ENST00000488058 APOBEC3GQ9HC16 384 aaKnown RBP25.23■■□□□ 1.63
RNF38-208ENST00000488058 NDRG2Q9UN36 371 aaKnown RBP25.23■■□□□ 1.63
RNF38-208ENST00000488058 CCL26Q9Y258 94 aa25.23■■□□□ 1.63
RNF38-208ENST00000488058 MRPS17Q9Y2R5 130 aaKnown RBP25.23■■□□□ 1.63
RNF38-208ENST00000488058 SLC16A3O15427 465 aaKnown RBP25.22■■□□□ 1.63
RNF38-208ENST00000488058 CD44P16070 742 aaKnown RBP25.22■■□□□ 1.63
RNF38-208ENST00000488058 TARSP26639 723 aaKnown RBP25.22■■□□□ 1.63
RNF38-208ENST00000488058 KPNA1P52294 538 aaPredicted RBP25.22■■□□□ 1.63
RNF38-208ENST00000488058 UBE2HP62256 183 aa25.22■■□□□ 1.63
RNF38-208ENST00000488058 ANGPT1Q15389 498 aa25.22■■□□□ 1.63
RNF38-208ENST00000488058 DHTKD1Q96HY7 919 aaPredicted RBP25.22■■□□□ 1.63
RNF38-208ENST00000488058 CEP295NLQ96MC4 621 aa25.22■■□□□ 1.63
RNF38-208ENST00000488058 BCO2Q9BYV7 579 aa25.22■■□□□ 1.63
RNF38-208ENST00000488058 NIF3L1Q9GZT8 377 aa25.22■■□□□ 1.63
RNF38-208ENST00000488058 TRPV5Q9NQA5 729 aa25.22■■□□□ 1.63
RNF38-208ENST00000488058 TDP1Q9NUW8 608 aa25.22■■□□□ 1.63
RNF38-208ENST00000488058 TMEM30AQ9NV96 361 aa25.22■■□□□ 1.63
RNF38-208ENST00000488058 THG1LQ9NWX6 298 aaKnown RBP25.22■■□□□ 1.63
RNF38-208ENST00000488058 EHD2Q9NZN4 543 aa25.22■■□□□ 1.63
RNF38-208ENST00000488058 ANAPC1Q9H1A4 1944 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms