RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 STK32BQ9NY57 414 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 FNIP2Q9P278 1114 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 DMTF1Q9Y222 760 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 PAXBP1Q9Y5B6 917 aa4.32□□□□□ -1.72
SNRNP27-204ENST00000487029 AOX1Q06278 1338 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 TRIM43BA6NCK2 446 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 POM121BA6NF01 834 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 BTN3A1O00481 513 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 SETSIPP0DME0 302 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 TNFSF4P23510 183 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 STT3AP46977 705 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 RGS19P49795 217 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 ZNF135P52742 658 aaPredicted RBP4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 SSBP2P81877 361 aaPredicted RBP4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 BTKQ06187 659 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 SLC13A2Q13183 592 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 SRSF7Q16629 238 aaKnown RBP eCLIP4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 SLC44A4Q53GD3 710 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 C10orf62Q5T681 223 aaPredicted RBP4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 C11orf87Q6NUJ2 197 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 SMC5Q8IY18 1101 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 EXOC8Q8IYI6 725 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 LNX2Q8N448 690 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 SLC17A8Q8NDX2 589 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 TMIEQ8NEW7 156 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 NUP133Q8WUM0 1156 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 MAML1Q92585 1016 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 TRIM43Q96BQ3 446 aaPredicted RBP4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 SARAFQ96BY9 339 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 KLHL32Q96NJ5 620 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 POLR3GLQ9BT43 218 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 IMPG2Q9BZV3 1241 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 ZNF518BQ9C0D4 1074 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 TINAGL1Q9GZM7 467 aaPredicted RBP4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 REXO4Q9GZR2 422 aaKnown RBP4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 SMURF2Q9HAU4 748 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 PLCB1Q9NQ66 1216 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 COL20A1Q9P218 1284 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 PADI4Q9UM07 663 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 PLEKHM1Q9Y4G2 1056 aa4.31□□□□□ -1.72
SNRNP27-204ENST00000487029 F8W8V4 182 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 DNAJB5O75953 348 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 UNC5CO95185 931 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 ONECUT2O95948 504 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 GRPP07492 148 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 PARP1P09874 1014 aaKnown RBP4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 CKBP12277 381 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 TSHRP16473 764 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 GCSHP23434 173 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 VAV2P52735 878 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 POU6F2P78424 691 aaPredicted RBP4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 SLFN5Q08AF3 891 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 RAB32Q13637 225 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 NOMO2Q5JPE7 1267 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 C3orf38Q5JPI3 329 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 LMBRD2Q68DH5 695 aaPredicted RBP4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 C1orf228Q6PIY5 440 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 CRELD2Q6UXH1 353 aaPredicted RBP4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 USP37Q86T82 979 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 CCDC33Q8N5R6 958 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 SSH3Q8TE77 659 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 HASPINQ8TF76 798 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 ZNF48Q96MX3 618 aaPredicted RBP4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 HEPHQ9BQS7 1158 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 SELENOOQ9BVL4 669 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 COLEC11Q9BWP8 271 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 RNPEPQ9H4A4 650 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 KCNE5Q9UJ90 142 aa4.3□□□□□ -1.72
SNRNP27-204ENST00000487029 A0A087WWL8 130 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 ABHD14A-ACY1A0A1B0GW23 586 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 E9PLN8 166 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 M0QYG6 137 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 IFRD1O00458 451 aaPredicted RBP4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 GPANK1O95872 356 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 PIM1P11309 404 aaPredicted RBP4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 WT1P19544 449 aaPredicted RBP4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 SLC11A2P49281 568 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 RPS16P62249 146 aaKnown RBP4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 TCF15Q12870 199 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 CTBP1Q13363 440 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 EZH2Q15910 746 aaKnown RBP4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 GEN1Q17RS7 908 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 AMOTQ4VCS5 1084 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 MTX3Q5HYI7 312 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 FAM209BQ5JX69 171 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 DGKKQ5KSL6 1271 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 IZUMO3Q5VZ72 239 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 PTF1AQ7RTS3 328 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 MICU3Q86XE3 530 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 LIX1LQ8IVB5 337 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 DNAJC5GQ8N7S2 189 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 ENAHQ8N8S7 591 aaPredicted RBP4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 VKORC1Q9BQB6 163 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 CNPPD1Q9BV87 410 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 TLR10Q9BXR5 811 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 CERS4Q9HA82 394 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 ARFGAP3Q9NP61 516 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 SERHLQ9NQF3 203 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 AGAP1Q9UPQ3 857 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 TMX2Q9Y320 296 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms