RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 LCLAT1Q6UWP7 414 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 CENPUQ71F23 418 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 TAX1BP1Q86VP1 789 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 PACS2Q86VP3 889 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 LRRC34Q8IZ02 419 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 KIAA0319LQ8IZA0 1049 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 ACTL9Q8TC94 416 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 DYDC1Q8WWB3 177 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 PRCCQ92733 491 aaPredicted RBP17.79■□□□□ 0.44
FDPS-212ENST00000487002 NAALADL1Q9UQQ1 740 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 FARP1Q9Y4F1 1045 aaPredicted RBP17.79■□□□□ 0.44
FDPS-212ENST00000487002 ZNF236Q9UL36 1845 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 PDHXO00330 501 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 ALOX15BO15296 676 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 CST8O60676 142 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 CSDE1O75534 798 aaKnown RBP17.79■□□□□ 0.44
FDPS-212ENST00000487002 ZSCAN5DPP0CG00 497 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 ZNF143P52747 638 aaPredicted RBP17.79■□□□□ 0.44
FDPS-212ENST00000487002 PLCB3Q01970 1234 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 ORC1Q13415 861 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 RASA2Q15283 850 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 GRIK4Q16099 956 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 SMTNL2Q2TAL5 461 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 CNPY4Q8N129 248 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 EMC1Q8N766 993 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 HAUS1Q96CS2 278 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 HEXIM2Q96MH2 286 aaKnown RBP17.79■□□□□ 0.44
FDPS-212ENST00000487002 TMEM121Q9BTD3 319 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 KDM4CQ9H3R0 1056 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 RSAD1Q9HA92 442 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 UBN1Q9NPG3 1134 aa17.79■□□□□ 0.44
FDPS-212ENST00000487002 EXOC1LA0A1B0GW35 172 aa17.78■□□□□ 0.44
FDPS-212ENST00000487002 APOC4-APOC2K7ER74 178 aa17.78■□□□□ 0.44
FDPS-212ENST00000487002 TRUB2O95900 331 aaKnown RBP17.78■□□□□ 0.44
FDPS-212ENST00000487002 APOC2P02655 101 aa17.78■□□□□ 0.44
FDPS-212ENST00000487002 ETS1P14921 441 aa17.78■□□□□ 0.44
FDPS-212ENST00000487002 BRAFP15056 766 aa17.78■□□□□ 0.44
FDPS-212ENST00000487002 MIPP30301 263 aa17.78■□□□□ 0.44
FDPS-212ENST00000487002 MKRN3Q13064 507 aaKnown RBP17.78■□□□□ 0.44
FDPS-212ENST00000487002 FAM102AQ5T9C2 384 aaPredicted RBP17.78■□□□□ 0.44
FDPS-212ENST00000487002 ARHGEF18Q6ZSZ5 1173 aa17.78■□□□□ 0.44
FDPS-212ENST00000487002 PPIL6Q8IXY8 311 aa17.78■□□□□ 0.44
FDPS-212ENST00000487002 CNPY3Q9BT09 278 aa17.78■□□□□ 0.44
FDPS-212ENST00000487002 NT5C1AQ9BXI3 368 aa17.78■□□□□ 0.44
FDPS-212ENST00000487002 OSBPL7Q9BZF2 842 aa17.78■□□□□ 0.44
FDPS-212ENST00000487002 PLEKHA5Q9HAU0 1116 aa17.78■□□□□ 0.44
FDPS-212ENST00000487002 CAPN7Q9Y6W3 813 aa17.78■□□□□ 0.44
FDPS-212ENST00000487002 UTRNP46939 3433 aa17.78■□□□□ 0.44
FDPS-212ENST00000487002 SNAI1O95863 264 aaPredicted RBP17.77■□□□□ 0.44
FDPS-212ENST00000487002 MMP3P08254 477 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 GPD1P21695 349 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 NDST1P52848 882 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 CDC42EP1Q00587 391 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 DUSP28Q4G0W2 176 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 ANKRD20A8PQ5CZ79 823 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 KCNT1Q5JUK3 1230 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 CYP4F22Q6NT55 531 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 PPP1R21Q6ZMI0 780 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 KCTD6Q8NC69 237 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 CCT6BQ92526 530 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 PPP1R16BQ96T49 567 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 SENP1Q9P0U3 644 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 FETUBQ9UGM5 382 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 USP18Q9UMW8 372 aa17.77■□□□□ 0.44
FDPS-212ENST00000487002 PDCD11Q14690 1871 aaKnown RBP17.77■□□□□ 0.44
FDPS-212ENST00000487002 VIMP08670 466 aaKnown RBP17.77■□□□□ 0.43
FDPS-212ENST00000487002 SETSIPP0DME0 302 aa17.77■□□□□ 0.43
FDPS-212ENST00000487002 IFNAR2P48551 515 aa17.77■□□□□ 0.43
FDPS-212ENST00000487002 GTF2A2P52657 109 aa17.77■□□□□ 0.43
FDPS-212ENST00000487002 PCBP1Q15365 356 aaKnown RBP eCLIP17.77■□□□□ 0.434e-7■□□□□ 9.7
FDPS-212ENST00000487002 MARCH8Q5T0T0 291 aa17.77■□□□□ 0.43
FDPS-212ENST00000487002 ANKRD23Q86SG2 305 aa17.77■□□□□ 0.43
FDPS-212ENST00000487002 CCDC13Q8IYE1 715 aa17.77■□□□□ 0.43
FDPS-212ENST00000487002 CKAP2Q8WWK9 683 aa17.77■□□□□ 0.43
FDPS-212ENST00000487002 MAML1Q92585 1016 aa17.77■□□□□ 0.43
FDPS-212ENST00000487002 C2CD4BA6NLJ0 364 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 ENDOD1O94919 500 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 ITGBL1O95965 494 aaPredicted RBP17.76■□□□□ 0.43
FDPS-212ENST00000487002 IFNB1P01574 187 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 YBX3P16989 372 aaKnown RBP eCLIP17.76■□□□□ 0.43
FDPS-212ENST00000487002 SLC18A1P54219 525 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 DYNLT1P63172 113 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 GRB14Q14449 540 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 HIF1AQ16665 826 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 MAP1SQ66K74 1059 aaPredicted RBP17.76■□□□□ 0.43
FDPS-212ENST00000487002 CYP4X1Q8N118 509 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 RSAD2Q8WXG1 361 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 KIF12Q96FN5 646 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 SGSM3Q96HU1 749 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 MS4A4AQ96JQ5 239 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 KCNK9Q9NPC2 374 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 NKIRAS1Q9NYS0 192 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 SLC24A2Q9UI40 661 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 TSPAN16Q9UKR8 245 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 RRN3P2A6NIE6 340 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 H0YHG0 523 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 DPYSL4O14531 572 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 MCF2LO15068 1137 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 CREB1P16220 341 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 DGKDQ16760 1214 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms