RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 SLC27A1Q6PCB7 646 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 SLFN11Q7Z7L1 901 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 TAX1BP1Q86VP1 789 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 OTUD6BQ8N6M0 293 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 UBL4BQ8N7F7 174 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 HDAC7Q8WUI4 952 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 CASKIN2Q8WXE0 1202 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 RIN2Q8WYP3 895 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-208ENST00000486533 SUSD6Q92537 303 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 TIPINQ9BVW5 301 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 VN1R3Q9BXE9 311 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 S1PR5Q9H228 398 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 CARD9Q9H257 536 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 STK39Q9UEW8 545 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 SALL4Q9UJQ4 1053 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 FAM169AQ9Y6X4 670 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 MYH11P35749 1972 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 GOLGA6L7A0A1B0GV03 622 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 LOC730098B7Z3J9 87 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 C2CD2LO14523 706 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 NRP1O14786 923 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 RAD51CO43502 376 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 GLI1P08151 1106 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 MAPTP10636 758 aaKnown RBP9.57□□□□□ -0.88
COL12A1-208ENST00000486533 EPCAMP16422 314 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 AKAP5P24588 427 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 CARSP49589 748 aaKnown RBP9.57□□□□□ -0.88
COL12A1-208ENST00000486533 TTMPQ5BVD1 217 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 ARSHQ5FYA8 562 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 ZNF571Q7Z3V5 609 aaPredicted RBP9.57□□□□□ -0.88
COL12A1-208ENST00000486533 DAAM2Q86T65 1068 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 SLC9A9Q8IVB4 645 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 KLHL7Q8IXQ5 586 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 MYCT1Q8N699 235 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 LRRC57Q8N9N7 239 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 TSEN2Q8NCE0 465 aaKnown RBP9.57□□□□□ -0.88
COL12A1-208ENST00000486533 SLC35C1Q96A29 364 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 EMILIN2Q9BXX0 1053 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 C2orf40Q9H1Z8 148 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 BHMT2Q9H2M3 363 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 TMEM206Q9H813 350 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 ACTR5Q9H9F9 607 aaPredicted RBP9.57□□□□□ -0.88
COL12A1-208ENST00000486533 TMBIM4Q9HC24 238 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 MRPL17Q9NRX2 175 aaKnown RBP9.57□□□□□ -0.88
COL12A1-208ENST00000486533 PRMT7Q9NVM4 692 aaPredicted RBP9.57□□□□□ -0.88
COL12A1-208ENST00000486533 TMEM51Q9NW97 253 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 CDH22Q9UJ99 828 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 NENFQ9UMX5 172 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 PLAAQ9Y263 795 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 GIT1Q9Y2X7 761 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 IRAK3Q9Y616 596 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 MUC6Q6W4X9 2439 aa9.57□□□□□ -0.88
COL12A1-208ENST00000486533 A0A1B0GUA9 196 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 MAPK13O15264 365 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 URODP06132 367 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 WEE2P0C1S8 567 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 TNFAIP3P21580 790 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 KLRC2P26717 231 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 CTNNA1P35221 906 aaKnown RBP9.56□□□□□ -0.88
COL12A1-208ENST00000486533 MDH1P40925 334 aaKnown RBP9.56□□□□□ -0.88
COL12A1-208ENST00000486533 FMO5P49326 533 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 HADHBP55084 474 aaKnown RBP9.56□□□□□ -0.88
COL12A1-208ENST00000486533 MYL7Q01449 175 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 PRPF4BQ13523 1007 aaKnown RBP9.56□□□□□ -0.88
COL12A1-208ENST00000486533 MAPK6Q16659 721 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 CEP85LQ5SZL2 805 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 RARS2Q5T160 578 aaKnown RBP9.56□□□□□ -0.88
COL12A1-208ENST00000486533 CDCA2Q69YH5 1023 aaPredicted RBP9.56□□□□□ -0.88
COL12A1-208ENST00000486533 C11orf63Q6NUN7 778 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 USP37Q86T82 979 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 COLGALT2Q8IYK4 626 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 C12orf76Q8N812 135 aaPredicted RBP9.56□□□□□ -0.88
COL12A1-208ENST00000486533 GLIS3Q8NEA6 775 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 DEPTORQ8TB45 409 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 BSNDQ8WZ55 320 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 FAM122AQ96E09 287 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 MS4A14Q96JA4 679 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 IFT74Q96LB3 600 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 RPS6KC1Q96S38 1066 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 ADAM7Q9H2U9 754 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 DZANK1Q9NVP4 752 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 KLK14Q9P0G3 267 aa9.56□□□□□ -0.88
COL12A1-208ENST00000486533 MTRF1LQ9UGC7 380 aaKnown RBP9.56□□□□□ -0.88
COL12A1-208ENST00000486533 TECTAO75443 2155 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 NPHP3-ACAD11A0A0J9YXS1 232 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 ANKRD62A6NC57 917 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 H0YHG0 523 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 INPPL1O15357 1258 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 AKAP3O75969 853 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 PRKCBP05771 671 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 CNPP09543 421 aaKnown RBP9.55□□□□□ -0.88
COL12A1-208ENST00000486533 SLC9A1P19634 815 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 LSP1P33241 339 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 PLA2G5P39877 138 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 NAMPTP43490 491 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 DNA2P51530 1060 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 GUCY2FP51841 1108 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 DSC1Q08554 894 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 IFFO1Q0D2I5 559 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 TCEAL1Q15170 157 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms