RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 ENDOD1O94919 500 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 ITGAVP06756 1048 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 MYZAPP0CAP1 466 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 WARSP23381 471 aaKnown RBP12.58□□□□□ -0.4
PKP4-213ENST00000486254 ACADSBP45954 432 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 PLTPP55058 493 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 ZNF200P98182 395 aaPredicted RBP12.58□□□□□ -0.4
PKP4-213ENST00000486254 ZNF844Q08AG5 666 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 MGAT3Q09327 533 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 BST2Q10589 180 aaKnown RBP12.58□□□□□ -0.4
PKP4-213ENST00000486254 GOLGA7BQ2TAP0 167 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 TTMPQ5BVD1 217 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 OLFML1Q6UWY5 402 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 MFSD7Q6UXD7 560 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 BBS12Q6ZW61 710 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 PHLDB2Q86SQ0 1253 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 HOOK3Q86VS8 718 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 ANKRD52Q8NB46 1076 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 JOSD2Q8TAC2 188 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 KBTBD7Q8WVZ9 684 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 TEKT4Q8WW24 435 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 RIN2Q8WYP3 895 aaPredicted RBP12.58□□□□□ -0.4
PKP4-213ENST00000486254 C18orf25Q96B23 403 aaPredicted RBP12.58□□□□□ -0.4
PKP4-213ENST00000486254 TNIP3Q96KP6 325 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 MRPL45Q9BRJ2 306 aaKnown RBP12.58□□□□□ -0.4
PKP4-213ENST00000486254 PLEKHA4Q9H4M7 779 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 TMBIM4Q9HC24 238 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 METTL5Q9NRN9 209 aaKnown RBP12.58□□□□□ -0.4
PKP4-213ENST00000486254 HES2Q9Y543 173 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 CDY2AQ9Y6F7 541 aa12.58□□□□□ -0.4
PKP4-213ENST00000486254 PPEF2O14830 753 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 GPR182O15218 404 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 TP73O15350 636 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 ZNF623O75123 536 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 GJB6O95452 261 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 ATF2P15336 505 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 GPD1P21695 349 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 FLT3P36888 993 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 PMS2P54278 862 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 VCPP55072 806 aaKnown RBP12.57□□□□□ -0.4
PKP4-213ENST00000486254 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
PKP4-213ENST00000486254 OASLQ15646 514 aaKnown RBP12.57□□□□□ -0.4
PKP4-213ENST00000486254 NBPF20Q3BBV1 942 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 ODF2Q5BJF6 829 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 PPP1R26Q5T8A7 1209 aaPredicted RBP12.57□□□□□ -0.4
PKP4-213ENST00000486254 FAM102AQ5T9C2 384 aaPredicted RBP12.57□□□□□ -0.4
PKP4-213ENST00000486254 TWF2Q6IBS0 349 aaKnown RBP12.57□□□□□ -0.4
PKP4-213ENST00000486254 CCSAPQ6IQ19 270 aaPredicted RBP12.57□□□□□ -0.4
PKP4-213ENST00000486254 KDM7AQ6ZMT4 941 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 SLC26A9Q7LBE3 791 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 MRPL10Q7Z7H8 261 aaKnown RBP12.57□□□□□ -0.4
PKP4-213ENST00000486254 TTC30AQ86WT1 665 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 ARFGAP1Q8N6T3 406 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 PCSK9Q8NBP7 692 aaKnown RBP12.57□□□□□ -0.4
PKP4-213ENST00000486254 APPL2Q8NEU8 664 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 SLC35B2Q8TB61 432 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 C1orf54Q8WWF1 131 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 HSFY1Q96LI6 401 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 TRIM31Q9BZY9 425 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 EPB41L4BQ9H329 900 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 ABT1Q9ULW3 272 aaKnown RBP12.57□□□□□ -0.4
PKP4-213ENST00000486254 R3HDM2Q9Y2K5 976 aaKnown RBP12.57□□□□□ -0.4
PKP4-213ENST00000486254 GIT1Q9Y2X7 761 aa12.57□□□□□ -0.4
PKP4-213ENST00000486254 LRRD1A4D1F6 860 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 E5RJQ4 531 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 GOLGA8SH3BPF8 625 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 SMAPO00193 183 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 PTGESO14684 152 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 HUS1O60921 280 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 KRT14P02533 472 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 TCF4P15884 667 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 AKAP5P24588 427 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 KLRC2P26717 231 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 SSR1P43307 286 aaKnown RBP12.56□□□□□ -0.4
PKP4-213ENST00000486254 PTPN9P43378 593 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 KCNJ1P48048 391 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 BYSLQ13895 437 aaKnown RBP12.56□□□□□ -0.4
PKP4-213ENST00000486254 FAM26DQ5JW98 314 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 GLRA4Q5JXX5 417 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 CEP85LQ5SZL2 805 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 MAP3K21Q5TCX8 1036 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 DENND2CQ68D51 928 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 GDF6Q6KF10 455 aaPredicted RBP12.56□□□□□ -0.4
PKP4-213ENST00000486254 ZNF365Q70YC5 407 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 TMEM86AQ8N2M4 240 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 ARFGAP2Q8N6H7 521 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 ALLCQ8N6M5 410 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 UBLCP1Q8WVY7 318 aaPredicted RBP12.56□□□□□ -0.4
PKP4-213ENST00000486254 ATG4AQ8WYN0 398 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 RAPGEF5Q92565 580 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 ARL8AQ96BM9 186 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 RSAD1Q9HA92 442 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 FAM105AQ9NUU6 356 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 TJP2Q9UDY2 1190 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 ASIC3Q9UHC3 531 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 USP18Q9UMW8 372 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 A8MXQ7 604 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 GABRDO14764 452 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 MDM4O15151 490 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 TRUB2O95900 331 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms