RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 CHMP5Q9NZZ3 219 aa20.85■□□□□ 0.93
SNX5-213ENST00000486039 DLGAP2Q9P1A6 1054 aa20.85■□□□□ 0.93
SNX5-213ENST00000486039 MAN1B1Q9UKM7 699 aa20.85■□□□□ 0.93
SNX5-213ENST00000486039 KANSL1LA0AUZ9 987 aa20.84■□□□□ 0.93
SNX5-213ENST00000486039 CETN3O15182 167 aa20.84■□□□□ 0.93
SNX5-213ENST00000486039 KINO60870 393 aaKnown RBP20.84■□□□□ 0.93
SNX5-213ENST00000486039 PRAMEF12O95522 483 aa20.84■□□□□ 0.93
SNX5-213ENST00000486039 CD72P21854 359 aa20.84■□□□□ 0.93
SNX5-213ENST00000486039 GRIK1P39086 918 aa20.84■□□□□ 0.93
SNX5-213ENST00000486039 PIK3CAP42336 1068 aa20.84■□□□□ 0.93
SNX5-213ENST00000486039 TXNDC8Q6A555 127 aa20.84■□□□□ 0.93
SNX5-213ENST00000486039 TPRG1Q6ZUI0 275 aa20.84■□□□□ 0.93
SNX5-213ENST00000486039 ZC3H3Q8IXZ2 948 aaKnown RBP20.84■□□□□ 0.93
SNX5-213ENST00000486039 B3GALNT2Q8NCR0 500 aa20.84■□□□□ 0.93
SNX5-213ENST00000486039 PJA1Q8NG27 643 aa20.84■□□□□ 0.93
SNX5-213ENST00000486039 SPATA17Q96L03 361 aa20.84■□□□□ 0.93
SNX5-213ENST00000486039 B3GNT5Q9BYG0 378 aa20.84■□□□□ 0.93
SNX5-213ENST00000486039 SMG9Q9H0W8 520 aaKnown RBP20.84■□□□□ 0.93
SNX5-213ENST00000486039 MMRN2Q9H8L6 949 aa20.84■□□□□ 0.93
SNX5-213ENST00000486039 TRPV5Q9NQA5 729 aa20.84■□□□□ 0.93
SNX5-213ENST00000486039 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.84■□□□□ 0.93
SNX5-213ENST00000486039 UXTQ9UBK9 157 aaPredicted RBP20.84■□□□□ 0.93
SNX5-213ENST00000486039 MTF2Q9Y483 593 aaPredicted RBP20.84■□□□□ 0.93
SNX5-213ENST00000486039 DMDP11532 3685 aa20.83■□□□□ 0.93
SNX5-213ENST00000486039 TRIM49BA6NDI0 452 aa20.83■□□□□ 0.93
SNX5-213ENST00000486039 ARNTLO00327 626 aa20.83■□□□□ 0.93
SNX5-213ENST00000486039 ZNF263O14978 683 aa20.83■□□□□ 0.93
SNX5-213ENST00000486039 LRRN2O75325 713 aa20.83■□□□□ 0.93
SNX5-213ENST00000486039 GLULP15104 373 aa20.83■□□□□ 0.93
SNX5-213ENST00000486039 CD44P16070 742 aaKnown RBP20.83■□□□□ 0.93
SNX5-213ENST00000486039 ASPAP45381 313 aa20.83■□□□□ 0.93
SNX5-213ENST00000486039 CACNA2D1P54289 1103 aa20.83■□□□□ 0.93
SNX5-213ENST00000486039 FCHO2Q0JRZ9 810 aa20.83■□□□□ 0.93
SNX5-213ENST00000486039 CMTM8Q8IZV2 173 aa20.83■□□□□ 0.93
SNX5-213ENST00000486039 MAB21L3Q8N8X9 362 aa20.83■□□□□ 0.93
SNX5-213ENST00000486039 ZNF518BQ9C0D4 1074 aa20.83■□□□□ 0.93
SNX5-213ENST00000486039 APOBEC3GQ9HC16 384 aaKnown RBP20.83■□□□□ 0.93
SNX5-213ENST00000486039 TMEM30AQ9NV96 361 aa20.83■□□□□ 0.93
SNX5-213ENST00000486039 OBP2AQ9NY56 170 aa20.83■□□□□ 0.93
SNX5-213ENST00000486039 CLDN5O00501 218 aa20.82■□□□□ 0.92
SNX5-213ENST00000486039 DPYSL4O14531 572 aa20.82■□□□□ 0.92
SNX5-213ENST00000486039 EPB41P11171 864 aaKnown RBP20.82■□□□□ 0.92
SNX5-213ENST00000486039 P4HA1P13674 534 aa20.82■□□□□ 0.92
SNX5-213ENST00000486039 BMP6P22004 513 aa20.82■□□□□ 0.92
SNX5-213ENST00000486039 DDX6P26196 483 aaKnown RBP eCLIP20.82■□□□□ 0.92
SNX5-213ENST00000486039 USP46P62068 366 aa20.82■□□□□ 0.92
SNX5-213ENST00000486039 MRPS31Q92665 395 aaKnown RBP20.82■□□□□ 0.92
SNX5-213ENST00000486039 C8orf48Q96LL4 319 aa20.82■□□□□ 0.92
SNX5-213ENST00000486039 CEP295NLQ96MC4 621 aa20.82■□□□□ 0.92
SNX5-213ENST00000486039 TSG101Q99816 390 aa20.82■□□□□ 0.92
SNX5-213ENST00000486039 GTPBP4Q9BZE4 634 aaKnown RBP20.82■□□□□ 0.92
SNX5-213ENST00000486039 TMEM8AQ9HCN3 771 aa20.82■□□□□ 0.92
SNX5-213ENST00000486039 LTB4R2Q9NPC1 389 aa20.82■□□□□ 0.92
SNX5-213ENST00000486039 ZMYM5Q9UJ78 669 aa20.82■□□□□ 0.92
SNX5-213ENST00000486039 SOBPA7XYQ1 873 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 F8VP50 259 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 TRIM66O15016 1216 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 CHADO15335 359 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 GTF2H1P32780 548 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 NOP14P78316 857 aaKnown RBP20.81■□□□□ 0.92
SNX5-213ENST00000486039 FKBP3Q00688 224 aaKnown RBP20.81■□□□□ 0.92
SNX5-213ENST00000486039 KRT39Q6A163 491 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 DENND5BQ6ZUT9 1274 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 PAQR9Q6ZVX9 377 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 MON1AQ86VX9 555 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 YAF2Q8IY57 180 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 BPIFB1Q8TDL5 484 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 BCO2Q9BYV7 579 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 ELOVL4Q9GZR5 314 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 HMGXB4Q9UGU5 601 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 CCL26Q9Y258 94 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 COL4A2P08572 1712 aa20.81■□□□□ 0.92
SNX5-213ENST00000486039 NUP210Q8TEM1 1887 aaPredicted RBP20.8■□□□□ 0.92
SNX5-213ENST00000486039 FAM170BA6NMN3 283 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 SLC16A3O15427 465 aaKnown RBP20.8■□□□□ 0.92
SNX5-213ENST00000486039 CCNE1P24864 410 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 ANXA13P27216 316 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 AVPR1AP37288 418 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 NDST1P52848 882 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 LRRC63Q05C16 580 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 ORC1Q13415 861 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 UBXN2BQ14CS0 331 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 ACOT1Q86TX2 421 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 C1orf210Q8IVY1 113 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 CELF5Q8N6W0 485 aaKnown RBP20.8■□□□□ 0.92
SNX5-213ENST00000486039 SEMA4DQ92854 862 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 USP13Q92995 863 aaPredicted RBP20.8■□□□□ 0.92
SNX5-213ENST00000486039 DHTKD1Q96HY7 919 aaPredicted RBP20.8■□□□□ 0.92
SNX5-213ENST00000486039 ZFYVE19Q96K21 471 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 TNIP3Q96KP6 325 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 OSBPL6Q9BZF3 934 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 PTPRDP23468 1912 aa20.8■□□□□ 0.92
SNX5-213ENST00000486039 TARSP26639 723 aaKnown RBP20.79■□□□□ 0.92
SNX5-213ENST00000486039 UBE2HP62256 183 aa20.79■□□□□ 0.92
SNX5-213ENST00000486039 MORC3Q14149 939 aa20.79■□□□□ 0.92
SNX5-213ENST00000486039 ZNF852Q6ZMS4 543 aa20.79■□□□□ 0.92
SNX5-213ENST00000486039 UNC93AQ86WB7 457 aa20.79■□□□□ 0.92
SNX5-213ENST00000486039 CRYBG2Q8N1P7 616 aa20.79■□□□□ 0.92
SNX5-213ENST00000486039 SLC22A12Q96S37 553 aa20.79■□□□□ 0.92
SNX5-213ENST00000486039 TTLL2Q9BWV7 592 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms