RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 TMTC1Q8IUR5 882 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 TMEM139Q8IV31 216 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 PASD1Q8IV76 773 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 LRRC8AQ8IWT6 810 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 PCDHB18PQ96TA0 734 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 CRISPLD1Q9H336 500 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 KRT82Q9NSB4 513 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 SEPT11Q9NVA2 429 aaKnown RBP18.61■□□□□ 0.57
CHMP3-207ENST00000485465 SLC27A5Q9Y2P5 690 aa18.61■□□□□ 0.57
CHMP3-207ENST00000485465 DDX3XO00571 662 aaKnown RBP eCLIP18.6■□□□□ 0.575e-10■■■□□ 17.8
CHMP3-207ENST00000485465 SEC24AO95486 1093 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 HAPLN1P10915 354 aaPredicted RBP18.6■□□□□ 0.57
CHMP3-207ENST00000485465 NPR3P17342 541 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 ANXA13P27216 316 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 CLCN4P51793 760 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 CACNA2D1P54289 1103 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 BST2Q10589 180 aaKnown RBP18.6■□□□□ 0.57
CHMP3-207ENST00000485465 ASTE1Q2TB18 679 aaPredicted RBP18.6■□□□□ 0.57
CHMP3-207ENST00000485465 VSTM1Q6UX27 236 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 WDTC1Q8N5D0 677 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 TTC9BQ8N6N2 239 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 SLC30A5Q8TAD4 765 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 SECISBP2LQ93073 1101 aaKnown RBP18.6■□□□□ 0.57
CHMP3-207ENST00000485465 CCDC42Q96M95 316 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 SMOQ99835 787 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.6■□□□□ 0.57
CHMP3-207ENST00000485465 TLE6Q9H808 572 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 CSNK1G1Q9HCP0 422 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 LMCD1Q9NZU5 365 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 HSFX1Q9UBD0 423 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 ADAMTS1Q9UHI8 967 aa18.6■□□□□ 0.57
CHMP3-207ENST00000485465 PER2O15055 1255 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 BEST1O76090 585 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 LSM8O95777 96 aaKnown RBP18.59■□□□□ 0.57
CHMP3-207ENST00000485465 GLUD1P00367 558 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 CYP1A1P04798 512 aaPredicted RBP18.59■□□□□ 0.57
CHMP3-207ENST00000485465 SPATA31D3P0C874 917 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 SETSIPP0DME0 302 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 ELF1P32519 619 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 CDH5P33151 784 aaPredicted RBP18.59■□□□□ 0.57
CHMP3-207ENST00000485465 GRIK1P39086 918 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 GPD2P43304 727 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 TUFMP49411 452 aaKnown RBP18.59■□□□□ 0.57
CHMP3-207ENST00000485465 MAP3K7CLP57077 242 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 SLC8A3P57103 927 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 PDE4CQ08493 712 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 DUSP6Q16828 381 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 CLEC16AQ2KHT3 1053 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 MGAT5BQ3V5L5 792 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 HABP4Q5JVS0 413 aaKnown RBP18.59■□□□□ 0.57
CHMP3-207ENST00000485465 CLEC20AQ6ZU45 233 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 SPATA31D4Q6ZUB0 917 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 RBM23Q86U06 439 aaKnown RBP18.59■□□□□ 0.57
CHMP3-207ENST00000485465 TCEAL8Q8IYN2 117 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 TMEM35BQ8NCS4 154 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 CCDC112Q8NEF3 446 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 SLC22A17Q8WUG5 538 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 SLC35F5Q8WV83 523 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 DEF6Q9H4E7 631 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 CYP4F11Q9HBI6 524 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 TMEM30AQ9NV96 361 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 FBXW11Q9UKB1 542 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 CEP83Q9Y592 693 aa18.59■□□□□ 0.57
CHMP3-207ENST00000485465 TRIOBPQ9H2D6 2365 aa18.58■□□□□ 0.56
CHMP3-207ENST00000485465 SOWAHDA6NJG2 315 aa18.58■□□□□ 0.56
CHMP3-207ENST00000485465 XPO1O14980 1071 aaKnown RBP18.58■□□□□ 0.56
CHMP3-207ENST00000485465 AKR1B10O60218 316 aa18.58■□□□□ 0.56
CHMP3-207ENST00000485465 NRIP1P48552 1158 aa18.58■□□□□ 0.56
CHMP3-207ENST00000485465 NOMO3P69849 1222 aa18.58■□□□□ 0.56
CHMP3-207ENST00000485465 NAA35Q5VZE5 725 aa18.58■□□□□ 0.56
CHMP3-207ENST00000485465 SCN4BQ8IWT1 228 aa18.58■□□□□ 0.56
CHMP3-207ENST00000485465 CCDC170Q8IYT3 715 aa18.58■□□□□ 0.56
CHMP3-207ENST00000485465 KREMEN2Q8NCW0 462 aa18.58■□□□□ 0.56
CHMP3-207ENST00000485465 C1orf131Q8NDD1 294 aaKnown RBP18.58■□□□□ 0.56
CHMP3-207ENST00000485465 ZMIZ2Q8NF64 920 aa18.58■□□□□ 0.56
CHMP3-207ENST00000485465 PPP2R3CQ969Q6 453 aa18.58■□□□□ 0.56
CHMP3-207ENST00000485465 C8orf48Q96LL4 319 aa18.58■□□□□ 0.56
CHMP3-207ENST00000485465 KCNK16Q96T55 309 aa18.58■□□□□ 0.56
CHMP3-207ENST00000485465 CDCA3Q99618 268 aaPredicted RBP18.58■□□□□ 0.56
CHMP3-207ENST00000485465 SEPT5Q99719 369 aaPredicted RBP18.58■□□□□ 0.56
CHMP3-207ENST00000485465 UBXN6Q9BZV1 441 aa18.58■□□□□ 0.56
CHMP3-207ENST00000485465 NSUN3Q9H649 340 aaKnown RBP18.58■□□□□ 0.56
CHMP3-207ENST00000485465 DMAP1Q9NPF5 467 aaPredicted RBP18.58■□□□□ 0.56
CHMP3-207ENST00000485465 A0A087X0T9 212 aa18.57■□□□□ 0.56
CHMP3-207ENST00000485465 F8VP50 259 aa18.57■□□□□ 0.56
CHMP3-207ENST00000485465 TULP2O00295 520 aa18.57■□□□□ 0.56
CHMP3-207ENST00000485465 PRRG1O14668 218 aa18.57■□□□□ 0.56
CHMP3-207ENST00000485465 TRIM66O15016 1216 aa18.57■□□□□ 0.56
CHMP3-207ENST00000485465 SOAT2O75908 522 aa18.57■□□□□ 0.56
CHMP3-207ENST00000485465 FAM228BP0C875 321 aa18.57■□□□□ 0.56
CHMP3-207ENST00000485465 UNGP13051 313 aaPredicted RBP18.57■□□□□ 0.56
CHMP3-207ENST00000485465 KIF11P52732 1056 aa18.57■□□□□ 0.56
CHMP3-207ENST00000485465 RPL10AP62906 217 aaKnown RBP18.57■□□□□ 0.56
CHMP3-207ENST00000485465 SLC18A3Q16572 532 aa18.57■□□□□ 0.56
CHMP3-207ENST00000485465 DDR2Q16832 855 aa18.57■□□□□ 0.56
CHMP3-207ENST00000485465 GPR153Q6NV75 609 aa18.57■□□□□ 0.56
CHMP3-207ENST00000485465 CPA5Q8WXQ8 436 aa18.57■□□□□ 0.56
CHMP3-207ENST00000485465 FAM161BQ96MY7 647 aa18.57■□□□□ 0.56
CHMP3-207ENST00000485465 CYTH4Q9UIA0 394 aa18.57■□□□□ 0.56
CHMP3-207ENST00000485465 HHLA1C9JL84 531 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms