RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 GPC5P78333 572 aa15.37■□□□□ 0.05
LRIF1-202ENST00000485275 BST2Q10589 180 aaKnown RBP15.37■□□□□ 0.05
LRIF1-202ENST00000485275 PTPN14Q15678 1187 aa15.37■□□□□ 0.05
LRIF1-202ENST00000485275 CTXN3Q4LDR2 81 aa15.37■□□□□ 0.05
LRIF1-202ENST00000485275 ZNF280DQ6N043 979 aa15.37■□□□□ 0.05
LRIF1-202ENST00000485275 THEM5Q8N1Q8 247 aa15.37■□□□□ 0.05
LRIF1-202ENST00000485275 SLC35F6Q8N357 371 aa15.37■□□□□ 0.05
LRIF1-202ENST00000485275 RNPC3Q96LT9 517 aaKnown RBP15.37■□□□□ 0.05
LRIF1-202ENST00000485275 SPG21Q9NZD8 308 aa15.37■□□□□ 0.05
LRIF1-202ENST00000485275 CEP83Q9Y592 693 aa15.37■□□□□ 0.05
LRIF1-202ENST00000485275 GRID2IPA4D2P6 1211 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 LINC01553A4QN01 128 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 SOD2P04179 222 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 NPR3P17342 541 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 RPL17P18621 184 aaKnown RBP15.36■□□□□ 0.05
LRIF1-202ENST00000485275 SLC39A12Q504Y0 691 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 GPRIN1Q7Z2K8 1008 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 ERICH1Q86X53 443 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 XYLT1Q86Y38 959 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 CPNE8Q86YQ8 564 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 TTC9BQ8N6N2 239 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 TMEM169Q96HH4 297 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 BTBD6Q96KE9 485 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 KCNK16Q96T55 309 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 GDF15Q99988 308 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 HERC2P3Q9BVR0 1158 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 SLC4A5Q9BY07 1137 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 DUSP16Q9BY84 665 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 CRISPLD1Q9H336 500 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 HESX1Q9UBX0 185 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 NR2E3Q9Y5X4 410 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 HHLA1C9JL84 531 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 C2CD2LO14523 706 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 FGF18O76093 207 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 BDNFP23560 247 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 PLA2G4AP47712 749 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 GABRB2P47870 512 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 RPL34P49207 117 aaKnown RBP15.36■□□□□ 0.05
LRIF1-202ENST00000485275 MAP3K7CLP57077 242 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 GNG11P61952 73 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 ETF1P62495 437 aaKnown RBP15.36■□□□□ 0.05
LRIF1-202ENST00000485275 TSPY1Q01534 308 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 TCEAL1Q15170 157 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 USP41Q3LFD5 358 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 ZNF569Q5MCW4 686 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 PPP1R15BQ5SWA1 713 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 PLEKHA7Q6IQ23 1121 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 SYT10Q6XYQ8 523 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 PIGZQ86VD9 579 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 LRRC57Q8N9N7 239 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 TPCN2Q8NHX9 752 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 AUTS2Q8WXX7 1259 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 RIN2Q8WYP3 895 aaPredicted RBP15.36■□□□□ 0.05
LRIF1-202ENST00000485275 PIK3R5Q8WYR1 880 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 VCPIP1Q96JH7 1222 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 PGLYRP2Q96PD5 576 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 MED10Q9BTT4 135 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 NUP85Q9BW27 656 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 AVENQ9NQS1 362 aaPredicted RBP15.36■□□□□ 0.05
LRIF1-202ENST00000485275 ST7Q9NRC1 585 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 MTRRQ9UBK8 725 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 PCDHGC5Q9Y5F6 944 aa15.36■□□□□ 0.05
LRIF1-202ENST00000485275 XPO1O14980 1071 aaKnown RBP15.35■□□□□ 0.05
LRIF1-202ENST00000485275 AP1G2O75843 785 aa15.35■□□□□ 0.05
LRIF1-202ENST00000485275 FAM200BP0CF97 657 aa15.35■□□□□ 0.05
LRIF1-202ENST00000485275 SETSIPP0DME0 302 aa15.35■□□□□ 0.05
LRIF1-202ENST00000485275 TNNT1P13805 278 aa15.35■□□□□ 0.05
LRIF1-202ENST00000485275 DSG1Q02413 1049 aa15.35■□□□□ 0.05
LRIF1-202ENST00000485275 MAMLD1Q13495 774 aa15.35■□□□□ 0.05
LRIF1-202ENST00000485275 DDX53Q86TM3 631 aaKnown RBP15.35■□□□□ 0.05
LRIF1-202ENST00000485275 KLHL23Q8NBE8 558 aa15.35■□□□□ 0.05
LRIF1-202ENST00000485275 ZNF564Q8TBZ8 553 aaPredicted RBP15.35■□□□□ 0.05
LRIF1-202ENST00000485275 CLEC4CQ8WTT0 213 aa15.35■□□□□ 0.05
LRIF1-202ENST00000485275 C17orf80Q9BSJ5 609 aa15.35■□□□□ 0.05
LRIF1-202ENST00000485275 MTIF3Q9H2K0 278 aaKnown RBP15.35■□□□□ 0.05
LRIF1-202ENST00000485275 CSNK1G1Q9HCP0 422 aa15.35■□□□□ 0.05
LRIF1-202ENST00000485275 CTTNBP2NLQ9P2B4 639 aa15.35■□□□□ 0.05
LRIF1-202ENST00000485275 CDY1Q9Y6F8 540 aa15.35■□□□□ 0.05
LRIF1-202ENST00000485275 ATG2AQ2TAZ0 1938 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 H0YGN5 161 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 PAPSS1O43252 624 aaPredicted RBP15.34■□□□□ 0.05
LRIF1-202ENST00000485275 KIF5CO60282 957 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 BUB1BO60566 1050 aaPredicted RBP15.34■□□□□ 0.05
LRIF1-202ENST00000485275 PALMO75781 387 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 MTA2O94776 668 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 CALB1P05937 261 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 MYBL1P10243 752 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 CYP2F1P24903 491 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 PBX2P40425 430 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 HADHBP55084 474 aaKnown RBP15.34■□□□□ 0.05
LRIF1-202ENST00000485275 GSCP56915 257 aaPredicted RBP15.34■□□□□ 0.05
LRIF1-202ENST00000485275 RPL7AP62424 266 aaKnown RBP15.34■□□□□ 0.05
LRIF1-202ENST00000485275 ZNF252P-AS1Q0IIN9 211 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 PSMD5Q16401 504 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 PTPROQ16827 1216 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 FAM183BPQ6ZVS7 135 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 ANKS3Q6ZW76 656 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 TMEM110Q86TL2 294 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 STKLD1Q8NE28 680 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 SMARCD1Q96GM5 515 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms