RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 DUSP16Q9BY84 665 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 AAASQ9NRG9 546 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 PCDHB12Q9Y5F1 795 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 GRXCR1A8MXD5 290 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 GOLGA8SH3BPF8 625 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 AP1G2O75843 785 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 GJB6O95452 261 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 CALB1P05937 261 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 MYBL1P10243 752 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 BDNFP23560 247 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 MAP3K7CLP57077 242 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 MRPL58Q14197 206 aaKnown RBP18.46■□□□□ 0.55
CCDC78-214ENST00000485091 RHOT2Q8IXI1 618 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 MSANTD4Q8NCY6 345 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 SLC35F5Q8WV83 523 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 RIN2Q8WYP3 895 aaPredicted RBP18.46■□□□□ 0.55
CCDC78-214ENST00000485091 C18orf8Q96DM3 657 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 VCPIP1Q96JH7 1222 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 PKMYT1Q99640 499 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 ZCWPW1Q9H0M4 648 aa18.46■□□□□ 0.55
CCDC78-214ENST00000485091 A0A0A6YYK5 440 aaPredicted RBP18.45■□□□□ 0.54
CCDC78-214ENST00000485091 FAM200BP0CF97 657 aa18.45■□□□□ 0.54
CCDC78-214ENST00000485091 SLC8A3P57103 927 aa18.45■□□□□ 0.54
CCDC78-214ENST00000485091 PLCB3Q01970 1234 aa18.45■□□□□ 0.54
CCDC78-214ENST00000485091 PTPROQ16827 1216 aa18.45■□□□□ 0.54
CCDC78-214ENST00000485091 ANKS3Q6ZW76 656 aa18.45■□□□□ 0.54
CCDC78-214ENST00000485091 SPATA2LQ8IUW3 424 aaPredicted RBP18.45■□□□□ 0.54
CCDC78-214ENST00000485091 DCP1BQ8IZD4 617 aaKnown RBP18.45■□□□□ 0.54
CCDC78-214ENST00000485091 RNF10Q8N5U6 811 aaKnown RBP18.45■□□□□ 0.54
CCDC78-214ENST00000485091 IPO4Q8TEX9 1081 aaKnown RBP18.45■□□□□ 0.54
CCDC78-214ENST00000485091 BTBD6Q96KE9 485 aa18.45■□□□□ 0.54
CCDC78-214ENST00000485091 PGLYRP2Q96PD5 576 aa18.45■□□□□ 0.54
CCDC78-214ENST00000485091 TMEM110-MUSTN1A8MSY1 372 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 E5RJQ4 531 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 H7C4K7 107 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 PALMO75781 387 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 SOD2P04179 222 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 SETSIPP0DME0 302 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 CPB1P15086 417 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 MYOGP15173 224 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 NPR3P17342 541 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 RPL17P18621 184 aaKnown RBP18.44■□□□□ 0.54
CCDC78-214ENST00000485091 CACNA2D1P54289 1103 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 MAPRE1Q15691 268 aaKnown RBP18.44■□□□□ 0.54
CCDC78-214ENST00000485091 RASIP1Q5U651 963 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 RSPO2Q6UXX9 243 aaPredicted RBP18.44■□□□□ 0.54
CCDC78-214ENST00000485091 CLEC20AQ6ZU45 233 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 ZNF564Q8TBZ8 553 aaPredicted RBP18.44■□□□□ 0.54
CCDC78-214ENST00000485091 ALS2CR12Q96Q35 445 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 KCNK16Q96T55 309 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 SMOQ99835 787 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 GOLPH3Q9H4A6 298 aa18.44■□□□□ 0.54
CCDC78-214ENST00000485091 ABI2Q9NYB9 513 aaPredicted RBP18.44■□□□□ 0.54
CCDC78-214ENST00000485091 KIAA1671Q9BY89 1806 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 OR6C75A6NL08 312 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 FGF18O76093 207 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 EFEMP2O95967 443 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 LCP1P13796 627 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 DNAJB2P25686 324 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 CASQ1P31415 396 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 IFI16Q16666 785 aaKnown RBP18.43■□□□□ 0.54
CCDC78-214ENST00000485091 FAM109BQ6ICB4 259 aaPredicted RBP18.43■□□□□ 0.54
CCDC78-214ENST00000485091 OR6B2Q6IFH4 312 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 DNAJC24Q6P3W2 148 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 PIGZQ86VD9 579 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 RNF168Q8IYW5 571 aaPredicted RBP18.43■□□□□ 0.54
CCDC78-214ENST00000485091 TPCN2Q8NHX9 752 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 SMARCD1Q96GM5 515 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 MIS12Q9H081 205 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 AVENQ9NQS1 362 aaPredicted RBP18.43■□□□□ 0.54
CCDC78-214ENST00000485091 TMEM30AQ9NV96 361 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 CEP290O15078 2479 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 GRID2IPA4D2P6 1211 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 KIF2AO00139 706 aaPredicted RBP18.43■□□□□ 0.54
CCDC78-214ENST00000485091 XPO1O14980 1071 aaKnown RBP18.43■□□□□ 0.54
CCDC78-214ENST00000485091 FANCGO15287 622 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 CSPG5O95196 566 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 LINC00271P0C7V0 271 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 CA8P35219 290 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 PPM1AP35813 382 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 KRT17Q04695 432 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 MAMLD1Q13495 774 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 PSMD5Q16401 504 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 C4orf50Q6ZRC1 276 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 DDX53Q86TM3 631 aaKnown RBP18.43■□□□□ 0.54
CCDC78-214ENST00000485091 XYLT1Q86Y38 959 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 VPS52Q8N1B4 723 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 KLHL23Q8NBE8 558 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 TRIM58Q8NG06 486 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 SP7Q8TDD2 431 aaPredicted RBP18.43■□□□□ 0.54
CCDC78-214ENST00000485091 AUTS2Q8WXX7 1259 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 SELENOOQ9BVL4 669 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 HERC2P3Q9BVR0 1158 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 SLC4A5Q9BY07 1137 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 TRIM7Q9C029 511 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 CHST7Q9NS84 486 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 PARVAQ9NVD7 372 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 UVRAGQ9P2Y5 699 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 STRIP2Q9ULQ0 834 aa18.43■□□□□ 0.54
CCDC78-214ENST00000485091 CDY1Q9Y6F8 540 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms