RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 NT5C1AQ9BXI3 368 aa20.35■□□□□ 0.85
SNX17-206ENST00000484886 IL21Q9HBE4 155 aa20.35■□□□□ 0.85
SNX17-206ENST00000484886 FAM49BQ9NUQ9 324 aa20.35■□□□□ 0.85
SNX17-206ENST00000484886 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.35■□□□□ 0.85
SNX17-206ENST00000484886 DPYSL4O14531 572 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 MBD3O95983 291 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 CCDC130P13994 396 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 RFX1P22670 979 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 INCA1Q0VD86 236 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 IFRD2Q12894 506 aaPredicted RBP20.34■□□□□ 0.85
SNX17-206ENST00000484886 FAM35AQ86V20 835 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 GPIHBP1Q8IV16 184 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 SUGP1Q8IWZ8 645 aaKnown RBP20.34■□□□□ 0.85
SNX17-206ENST00000484886 SIX5Q8N196 739 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 MRPS31Q92665 395 aaKnown RBP20.34■□□□□ 0.85
SNX17-206ENST00000484886 TATDN2Q93075 761 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 ELSPBP1Q96BH3 223 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 SPATA17Q96L03 361 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 TASP1Q9H6P5 420 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 KRT82Q9NSB4 513 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 CA14Q9ULX7 337 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 COQ4Q9Y3A0 265 aa20.34■□□□□ 0.85
SNX17-206ENST00000484886 FCARP24071 287 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 ADORA2BP29275 332 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 VIPR2P41587 438 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 GPC5P78333 572 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 GRM2Q14416 872 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 ZNF394Q53GI3 561 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 DENND5BQ6ZUT9 1274 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 TRIM59Q8IWR1 403 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 CRYBG2Q8N1P7 616 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 TTC39CQ8N584 583 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 SLC2A14Q8TDB8 520 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 TRMT2BQ96GJ1 504 aaKnown RBP20.33■□□□□ 0.85
SNX17-206ENST00000484886 SMARCD1Q96GM5 515 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 CNOT6LQ96LI5 555 aaKnown RBP20.33■□□□□ 0.85
SNX17-206ENST00000484886 C8orf48Q96LL4 319 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 TWNKQ96RR1 684 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 ARID3AQ99856 593 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 PLA2G2FQ9BZM2 168 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 TRPC7Q9HCX4 862 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 EHD2Q9NZN4 543 aa20.33■□□□□ 0.85
SNX17-206ENST00000484886 STK25O00506 426 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 CILPO75339 1184 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 AP1G2O75843 785 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 PDGFBP01127 241 aaPredicted RBP20.32■□□□□ 0.84
SNX17-206ENST00000484886 AFPP02771 609 aaKnown RBP20.32■□□□□ 0.84
SNX17-206ENST00000484886 F11P03951 625 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 CACNA2D1P54289 1103 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 KCNH2Q12809 1159 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 CUL2Q13617 745 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 ARID3BQ8IVW6 561 aaPredicted RBP20.32■□□□□ 0.84
SNX17-206ENST00000484886 YAF2Q8IY57 180 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 MAB21L3Q8N8X9 362 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 C12orf29Q8N999 325 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 FAXDC2Q96IV6 333 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 CEP295NLQ96MC4 621 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 NT5C1BQ96P26 610 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 DMAP1Q9NPF5 467 aaPredicted RBP20.32■□□□□ 0.84
SNX17-206ENST00000484886 SLC2A4RGQ9NR83 387 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 CISHQ9NSE2 258 aa20.32■□□□□ 0.84
SNX17-206ENST00000484886 DDX6P26196 483 aaKnown RBP eCLIP20.31■□□□□ 0.84
SNX17-206ENST00000484886 AVPR1AP37288 418 aa20.31■□□□□ 0.84
SNX17-206ENST00000484886 MTIF2P46199 727 aaKnown RBP20.31■□□□□ 0.84
SNX17-206ENST00000484886 MARSP56192 900 aaKnown RBP20.31■□□□□ 0.84
SNX17-206ENST00000484886 YWHAEP62258 255 aaKnown RBP20.31■□□□□ 0.84
SNX17-206ENST00000484886 TXNDC8Q6A555 127 aa20.31■□□□□ 0.84
SNX17-206ENST00000484886 BMP8AQ7Z5Y6 402 aa20.31■□□□□ 0.84
SNX17-206ENST00000484886 TMEM150AQ86TG1 271 aa20.31■□□□□ 0.84
SNX17-206ENST00000484886 FUKQ8N0W3 1084 aa20.31■□□□□ 0.84
SNX17-206ENST00000484886 FBXL6Q8N531 539 aa20.31■□□□□ 0.84
SNX17-206ENST00000484886 FLCNQ8NFG4 579 aa20.31■□□□□ 0.84
SNX17-206ENST00000484886 E2F7Q96AV8 911 aa20.31■□□□□ 0.84
SNX17-206ENST00000484886 MYRFLQ96LU7 910 aa20.31■□□□□ 0.84
SNX17-206ENST00000484886 HEXIM2Q96MH2 286 aaKnown RBP20.31■□□□□ 0.84
SNX17-206ENST00000484886 TRMT61BQ9BVS5 477 aaKnown RBP20.31■□□□□ 0.84
SNX17-206ENST00000484886 BRD9Q9H8M2 597 aa20.31■□□□□ 0.84
SNX17-206ENST00000484886 TRPV4Q9HBA0 871 aa20.31■□□□□ 0.84
SNX17-206ENST00000484886 TMEM30AQ9NV96 361 aa20.31■□□□□ 0.84
SNX17-206ENST00000484886 WNT16Q9UBV4 365 aa20.31■□□□□ 0.84
SNX17-206ENST00000484886 ZMYM5Q9UJ78 669 aa20.31■□□□□ 0.84
SNX17-206ENST00000484886 MYH10P35580 1976 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 HEPACAM2A8MVW5 462 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 P4HA2O15460 535 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 FAM200BP0CF97 657 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 PSMC3P17980 439 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 TBXAS1P24557 533 aaPredicted RBP20.3■□□□□ 0.84
SNX17-206ENST00000484886 USP46P62068 366 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 PFKPQ01813 784 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 SASS6Q6UVJ0 657 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 VITQ6UXI7 678 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 PAQR9Q6ZVX9 377 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 FAM114A1Q8IWE2 563 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 WHAMMQ8TF30 809 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 JAKMIP2Q96AA8 810 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 CYFIP2Q96F07 1278 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 MED15Q96RN5 788 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 KCNK16Q96T55 309 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 SLC46A2Q9BY10 475 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 SMG9Q9H0W8 520 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms