RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.76□□□□□ -0.213e-6■■■□□ 16.8
HDAC1-209ENST00000484305 MTF2Q9Y483 593 aaPredicted RBP13.76□□□□□ -0.21
HDAC1-209ENST00000484305 KIF26AQ9ULI4 1882 aaPredicted RBP13.76□□□□□ -0.21
HDAC1-209ENST00000484305 F5P12259 2224 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 MYH10P35580 1976 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 TRIM49BA6NDI0 452 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 SHISA7A6NL88 538 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 CLDN5O00501 218 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 DPYSL4O14531 572 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 ZNF263O14978 683 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 KINO60870 393 aaKnown RBP13.75□□□□□ -0.21
HDAC1-209ENST00000484305 TADA3O75528 432 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 GLULP15104 373 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 WEE1P30291 646 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 CACNA2D1P54289 1103 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 ENPEPQ07075 957 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 FCHO2Q0JRZ9 810 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 TPRG1Q6ZUI0 275 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 YAF2Q8IY57 180 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 CMTM8Q8IZV2 173 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 ADSSL1Q8N142 457 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 DTWD2Q8NBA8 298 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 TAS1R2Q8TE23 839 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 TAF4BQ92750 862 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 B3GNT5Q9BYG0 378 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 ZNF518BQ9C0D4 1074 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 MMRN2Q9H8L6 949 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 TRPV5Q9NQA5 729 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 TMEM30AQ9NV96 361 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 FAM86C1Q9NVL1 165 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 CHMP5Q9NZZ3 219 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 DLGAP2Q9P1A6 1054 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 UXTQ9UBK9 157 aaPredicted RBP13.75□□□□□ -0.21
HDAC1-209ENST00000484305 MAN1B1Q9UKM7 699 aa13.75□□□□□ -0.21
HDAC1-209ENST00000484305 CACNA1IQ9P0X4 2223 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 ARNTLO00327 626 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 CETN3O15182 167 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 CHADO15335 359 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 CD44P16070 742 aaKnown RBP13.74□□□□□ -0.21
HDAC1-209ENST00000484305 ASPAP45381 313 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 USP46P62068 366 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 UBXN2BQ14CS0 331 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 MRPS31Q92665 395 aaKnown RBP13.74□□□□□ -0.21
HDAC1-209ENST00000484305 ZFYVE19Q96K21 471 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 SPATA17Q96L03 361 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 TSG101Q99816 390 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 TMEM8AQ9HCN3 771 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 LTB4R2Q9NPC1 389 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 OBP2AQ9NY56 170 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 HMGXB4Q9UGU5 601 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 CCL26Q9Y258 94 aa13.74□□□□□ -0.21
HDAC1-209ENST00000484305 FAM170BA6NMN3 283 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 F8VP50 259 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 TRIM66O15016 1216 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 EPB41P11171 864 aaKnown RBP13.73□□□□□ -0.21
HDAC1-209ENST00000484305 P4HA1P13674 534 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 BMP6P22004 513 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 DDX6P26196 483 aaKnown RBP eCLIP13.73□□□□□ -0.21
HDAC1-209ENST00000484305 ANXA13P27216 316 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 AVPR1AP37288 418 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 NDST1P52848 882 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 NOP14P78316 857 aaKnown RBP13.73□□□□□ -0.21
HDAC1-209ENST00000484305 ORC1Q13415 861 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 KRT39Q6A163 491 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 DENND5BQ6ZUT9 1274 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 PAQR9Q6ZVX9 377 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 ACOT1Q86TX2 421 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 MON1AQ86VX9 555 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 ZC3H3Q8IXZ2 948 aaKnown RBP13.73□□□□□ -0.21
HDAC1-209ENST00000484305 CELF5Q8N6W0 485 aaKnown RBP13.73□□□□□ -0.21
HDAC1-209ENST00000484305 BPIFB1Q8TDL5 484 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 ATOH1Q92858 354 aaPredicted RBP13.73□□□□□ -0.21
HDAC1-209ENST00000484305 USP13Q92995 863 aaPredicted RBP13.73□□□□□ -0.21
HDAC1-209ENST00000484305 TNIP3Q96KP6 325 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 C8orf48Q96LL4 319 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 SLC22A12Q96S37 553 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 CYP2S1Q96SQ9 504 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 BCO2Q9BYV7 579 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 GTPBP4Q9BZE4 634 aaKnown RBP13.73□□□□□ -0.21
HDAC1-209ENST00000484305 APOBEC3GQ9HC16 384 aaKnown RBP13.73□□□□□ -0.21
HDAC1-209ENST00000484305 ZMYM5Q9UJ78 669 aa13.73□□□□□ -0.21
HDAC1-209ENST00000484305 HELZP42694 1942 aaKnown RBP13.72□□□□□ -0.21
HDAC1-209ENST00000484305 PATJQ8NI35 1801 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 SOBPA7XYQ1 873 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 CCNE1P24864 410 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 TARSP26639 723 aaKnown RBP13.72□□□□□ -0.21
HDAC1-209ENST00000484305 GTF2H1P32780 548 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 FKBP3Q00688 224 aaKnown RBP13.72□□□□□ -0.21
HDAC1-209ENST00000484305 LRRC63Q05C16 580 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 ANGPT1Q15389 498 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 ARHGAP29Q52LW3 1261 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 ZNF852Q6ZMS4 543 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 ALYREFQ86V81 257 aaKnown RBP13.72□□□□□ -0.21
HDAC1-209ENST00000484305 CRYBG2Q8N1P7 616 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 TTC8Q8TAM2 541 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 CSGALNACT1Q8TDX6 532 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 SEMA4DQ92854 862 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 DHTKD1Q96HY7 919 aaPredicted RBP13.72□□□□□ -0.21
HDAC1-209ENST00000484305 CEP295NLQ96MC4 621 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 KCNK16Q96T55 309 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms