RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 TMEM169Q96HH4 297 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 TWNKQ96RR1 684 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 HNRNPABQ99729 332 aaKnown RBP14.79□□□□□ -0.04
SMAD9-204ENST00000483941 SYT15Q9BQS2 421 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 MRPL47Q9HD33 250 aaKnown RBP14.79□□□□□ -0.04
SMAD9-204ENST00000483941 ACP6Q9NPH0 428 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 CYLDQ9NQC7 956 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 WDR35Q9P2L0 1181 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 SCN1AP35498 2009 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 TMCO5BA8MYB1 307 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 M0QYV0 167 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 LMO2P25791 158 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 GATMP50440 423 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 BCAT1P54687 386 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 GALCP54803 685 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 NOMO3P69849 1222 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 HTRA4P83105 476 aaPredicted RBP14.78□□□□□ -0.04
SMAD9-204ENST00000483941 PLCB3Q01970 1234 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 KRT17Q04695 432 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 TCEAL1Q15170 157 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 NFE2Q16621 373 aaPredicted RBP14.78□□□□□ -0.04
SMAD9-204ENST00000483941 FAM171A1Q5VUB5 890 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 NAA35Q5VZE5 725 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 ZNF280DQ6N043 979 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 FUT10Q6P4F1 479 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 KCNT2Q6UVM3 1135 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 CD300LGQ6UXG3 332 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 C4orf50Q6ZRC1 276 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 HFE2Q6ZVN8 426 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 ANKS3Q6ZW76 656 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 ERICH1Q86X53 443 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 TRIM58Q8NG06 486 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 MYCBPAPQ8TBZ2 947 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 HASPINQ8TF76 798 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 TFAP2BQ92481 460 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 RABGGTAQ92696 567 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 PCDHB18PQ96TA0 734 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 CWH43Q9H720 699 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 SYNCQ9H7C4 482 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 RC3H2Q9HBD1 1191 aaKnown RBP14.78□□□□□ -0.04
SMAD9-204ENST00000483941 AVENQ9NQS1 362 aaPredicted RBP14.78□□□□□ -0.04
SMAD9-204ENST00000483941 SPG21Q9NZD8 308 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 ADAM22Q9P0K1 906 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 UVRAGQ9P2Y5 699 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 CACNG4Q9UBN1 327 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 PRKAG3Q9UGI9 489 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 HMGXB4Q9UGU5 601 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 GTF3C4Q9UKN8 822 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 TSPAN16Q9UKR8 245 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 GUCA1BQ9UMX6 200 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 SSX2IPQ9Y2D8 614 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 SCINQ9Y6U3 715 aa14.78□□□□□ -0.04
SMAD9-204ENST00000483941 MICAL2O94851 1124 aa14.77□□□□□ -0.05
SMAD9-204ENST00000483941 FGFR3P22607 806 aa14.77□□□□□ -0.05
SMAD9-204ENST00000483941 ACADSBP45954 432 aa14.77□□□□□ -0.05
SMAD9-204ENST00000483941 CREMQ03060 361 aa14.77□□□□□ -0.05
SMAD9-204ENST00000483941 BST2Q10589 180 aaKnown RBP14.77□□□□□ -0.05
SMAD9-204ENST00000483941 GOLGA7BQ2TAP0 167 aa14.77□□□□□ -0.05
SMAD9-204ENST00000483941 USP41Q3LFD5 358 aa14.77□□□□□ -0.05
SMAD9-204ENST00000483941 INTS6LQ5JSJ4 861 aaKnown RBP14.77□□□□□ -0.05
SMAD9-204ENST00000483941 KIAA1841Q6NSI8 718 aa14.77□□□□□ -0.05
SMAD9-204ENST00000483941 OSTM1Q86WC4 334 aa14.77□□□□□ -0.05
SMAD9-204ENST00000483941 GPR65Q8IYL9 337 aa14.77□□□□□ -0.05
SMAD9-204ENST00000483941 SYCE1Q8N0S2 351 aa14.77□□□□□ -0.05
SMAD9-204ENST00000483941 RFFLQ8WZ73 363 aa14.77□□□□□ -0.05
SMAD9-204ENST00000483941 PABPC5Q96DU9 382 aaKnown RBP14.77□□□□□ -0.05
SMAD9-204ENST00000483941 IGSF21Q96ID5 467 aa14.77□□□□□ -0.05
SMAD9-204ENST00000483941 MED10Q9BTT4 135 aa14.77□□□□□ -0.05
SMAD9-204ENST00000483941 TTPALQ9BTX7 342 aa14.77□□□□□ -0.05
SMAD9-204ENST00000483941 ITGB1P05556 798 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 ABCB4P21439 1286 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 MMP8P22894 467 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 ARHGAP25P42331 645 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 NOP2P46087 812 aaKnown RBP14.76□□□□□ -0.05
SMAD9-204ENST00000483941 ETF1P62495 437 aaKnown RBP14.76□□□□□ -0.05
SMAD9-204ENST00000483941 DNTTIP2Q5QJE6 756 aaKnown RBP14.76□□□□□ -0.05
SMAD9-204ENST00000483941 PPP1R26Q5T8A7 1209 aaPredicted RBP14.76□□□□□ -0.05
SMAD9-204ENST00000483941 FAM171BQ6P995 826 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 EP400NLQ6ZTU2 488 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 NYAP1Q6ZVC0 841 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 ZDHHC17Q8IUH5 632 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 PASD1Q8IV76 773 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 ADHFE1Q8IWW8 467 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 MCOLN2Q8IZK6 566 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 C12orf29Q8N999 325 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 SP7Q8TDD2 431 aaPredicted RBP14.76□□□□□ -0.05
SMAD9-204ENST00000483941 C2orf15Q8WU43 125 aaKnown RBP14.76□□□□□ -0.05
SMAD9-204ENST00000483941 CPA5Q8WXQ8 436 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 ZNF653Q96CK0 615 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 C18orf8Q96DM3 657 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 HSFY1Q96LI6 401 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 SAMD11Q96NU1 681 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 UBXN6Q9BZV1 441 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 PARVAQ9NVD7 372 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 MARCH5Q9NX47 278 aa14.76□□□□□ -0.05
SMAD9-204ENST00000483941 TIMM13Q9Y5L4 95 aaPredicted RBP14.76□□□□□ -0.05
SMAD9-204ENST00000483941 NCANO14594 1321 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 C19orf67A6NJJ6 358 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 USP27XA6NNY8 438 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 I3L4J1 428 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms