RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 GABRDO14764 452 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 PPP1R37O75864 691 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 FAM13AO94988 1023 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 USP17L7P0C7H9 530 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 TCF3P15923 654 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 POLR2BP30876 1174 aaKnown RBP13.85□□□□□ -0.19
UBR4-213ENST00000483922 PTGER3P43115 390 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 USP46P62068 366 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 USP39Q53GS9 565 aaKnown RBP13.85□□□□□ -0.19
UBR4-213ENST00000483922 RILPL1Q5EBL4 403 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 INTS6LQ5JSJ4 861 aaKnown RBP13.85□□□□□ -0.19
UBR4-213ENST00000483922 KIAA1211LQ6NV74 962 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 ZNF720Q7Z2F6 126 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 ADGRG2Q8IZP9 1017 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 TSTD1Q8NFU3 115 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 PIGKQ92643 395 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 RAD54LQ92698 747 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 ATP2A3Q93084 1043 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 CNOT6LQ96LI5 555 aaKnown RBP13.85□□□□□ -0.19
UBR4-213ENST00000483922 ZSCAN31Q96LW9 406 aaPredicted RBP13.85□□□□□ -0.19
UBR4-213ENST00000483922 RNF38Q9H0F5 515 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 ST6GALNAC4Q9H4F1 302 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 TMEM206Q9H813 350 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 ZDHHC4Q9NPG8 344 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 FSCN3Q9NQT6 498 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 SIX4Q9UIU6 781 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 AGAP1Q9UPQ3 857 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 ANAPC1Q9H1A4 1944 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 THADAQ6YHU6 1953 aa13.85□□□□□ -0.19
UBR4-213ENST00000483922 TCHHQ07283 1943 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 FASNP49327 2511 aaKnown RBP13.84□□□□□ -0.19
UBR4-213ENST00000483922 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 TRAV19A0A0A6YYK7 116 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 SGK1O00141 431 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 HYAL3O43820 417 aaPredicted RBP13.84□□□□□ -0.19
UBR4-213ENST00000483922 ITGB3P05106 788 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 CKMP06732 381 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 HDCP19113 662 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 PLCG1P19174 1290 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 LMO2P25791 158 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 IFNAR2P48551 515 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 DHPSP49366 369 aaPredicted RBP13.84□□□□□ -0.19
UBR4-213ENST00000483922 RPL10AP62906 217 aaKnown RBP13.84□□□□□ -0.19
UBR4-213ENST00000483922 FAM193AP78312 1265 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 POU5F1Q01860 360 aaKnown RBP13.84□□□□□ -0.19
UBR4-213ENST00000483922 RING1Q06587 406 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 CRY1Q16526 586 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 NFE2Q16621 373 aaPredicted RBP13.84□□□□□ -0.19
UBR4-213ENST00000483922 UAP1L1Q3KQV9 507 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 SV2CQ496J9 727 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 ARL6IP4Q66PJ3 421 aaKnown RBP13.84□□□□□ -0.19
UBR4-213ENST00000483922 FAM171BQ6P995 826 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 LRSAM1Q6UWE0 723 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 C12orf40Q86WS4 652 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 TMEFF1Q8IYR6 380 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 ALLCQ8N6M5 410 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 ACDQ96AP0 544 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 CDK5RAP3Q96JB5 506 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 ZHX3Q9H4I2 956 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 ABCB6Q9NP58 842 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 KLK13Q9UKR3 277 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 HCN2Q9UL51 889 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 MMP17Q9ULZ9 603 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 NME7Q9Y5B8 376 aa13.84□□□□□ -0.19
UBR4-213ENST00000483922 ASCC3Q8N3C0 2202 aaKnown RBP13.84□□□□□ -0.19
UBR4-213ENST00000483922 TNRC6BQ9UPQ9 1833 aaKnown RBP13.83□□□□□ -0.2
UBR4-213ENST00000483922 SPAARA0A1B0GVQ0 90 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 LEFTY2O00292 366 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 SCAMP3O14828 347 aaKnown RBP13.83□□□□□ -0.2
UBR4-213ENST00000483922 ADAM23O75077 832 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 SCP2P22307 547 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 P2RY2P41231 377 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 TSPY1Q01534 308 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 SOWAHAQ2M3V2 549 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 MAP7D1Q3KQU3 841 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 CFAP221Q4G0U5 840 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 MCTP1Q6DN14 999 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 SLFN12LQ6IEE8 588 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 USP49Q70CQ1 688 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 CYP2U1Q7Z449 544 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 LIMS2Q7Z4I7 341 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 PIP4P1Q86T03 277 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 SCN4BQ8IWT1 228 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 IL17RCQ8NAC3 791 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 FGFBP2Q9BYJ0 223 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 GDAP2Q9NXN4 497 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 UXTQ9UBK9 157 aaPredicted RBP13.83□□□□□ -0.2
UBR4-213ENST00000483922 EVLQ9UI08 416 aaPredicted RBP13.83□□□□□ -0.2
UBR4-213ENST00000483922 ARHGAP26Q9UNA1 814 aa13.83□□□□□ -0.2
UBR4-213ENST00000483922 A0A0A0MRY4 1105 aa13.82□□□□□ -0.2
UBR4-213ENST00000483922 CYP17A1P05093 508 aa13.82□□□□□ -0.2
UBR4-213ENST00000483922 ENGP17813 658 aa13.82□□□□□ -0.2
UBR4-213ENST00000483922 KIR2DL1P43626 348 aaPredicted RBP13.82□□□□□ -0.2
UBR4-213ENST00000483922 TFAMQ00059 246 aaKnown RBP13.82□□□□□ -0.2
UBR4-213ENST00000483922 SEMA3BQ13214 749 aa13.82□□□□□ -0.2
UBR4-213ENST00000483922 TRIM61Q5EBN2 209 aa13.82□□□□□ -0.2
UBR4-213ENST00000483922 RHBDF2Q6PJF5 856 aa13.82□□□□□ -0.2
UBR4-213ENST00000483922 ARMCX6Q7L4S7 300 aa13.82□□□□□ -0.2
UBR4-213ENST00000483922 TXNDC5Q8NBS9 432 aaKnown RBP13.82□□□□□ -0.2
UBR4-213ENST00000483922 KBTBD7Q8WVZ9 684 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms