RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 OGDHQ02218 1023 aa27.63■■■□□ 2.01
SHOX2-204ENST00000483851 PDE4CQ08493 712 aa27.63■■■□□ 2.01
SHOX2-204ENST00000483851 PLEKHG4Q58EX7 1191 aa27.63■■■□□ 2.01
SHOX2-204ENST00000483851 PMF1Q6P1K2 205 aa27.63■■■□□ 2.01
SHOX2-204ENST00000483851 DCLRE1AQ6PJP8 1040 aa27.63■■■□□ 2.01
SHOX2-204ENST00000483851 ANKRD33Q7Z3H0 272 aa27.63■■■□□ 2.01
SHOX2-204ENST00000483851 POLNQ7Z5Q5 900 aa27.63■■■□□ 2.01
SHOX2-204ENST00000483851 LINC01599Q8WXQ3 324 aa27.63■■■□□ 2.01
SHOX2-204ENST00000483851 TMEM161AQ9NX61 479 aa27.63■■■□□ 2.01
SHOX2-204ENST00000483851 PRDM4Q9UKN5 801 aa27.63■■■□□ 2.01
SHOX2-204ENST00000483851 HPCAL4Q9UM19 191 aa27.63■■■□□ 2.01
SHOX2-204ENST00000483851 E5RJQ4 531 aa27.62■■■□□ 2.01
SHOX2-204ENST00000483851 CYP11A1P05108 521 aa27.62■■■□□ 2.01
SHOX2-204ENST00000483851 ODC1P11926 461 aa27.62■■■□□ 2.01
SHOX2-204ENST00000483851 CETN2P41208 172 aa27.62■■■□□ 2.01
SHOX2-204ENST00000483851 SLC8A3P57103 927 aa27.62■■■□□ 2.01
SHOX2-204ENST00000483851 KLHL7Q8IXQ5 586 aa27.62■■■□□ 2.01
SHOX2-204ENST00000483851 IFT20Q8IY31 132 aa27.62■■■□□ 2.01
SHOX2-204ENST00000483851 C3orf58Q8NDZ4 430 aa27.62■■■□□ 2.01
SHOX2-204ENST00000483851 URGCPQ8TCY9 931 aa27.62■■■□□ 2.01
SHOX2-204ENST00000483851 RUNDC3BQ96NL0 473 aa27.62■■■□□ 2.01
SHOX2-204ENST00000483851 CRISPLD2Q9H0B8 497 aa27.62■■■□□ 2.01
SHOX2-204ENST00000483851 METTL5Q9NRN9 209 aaKnown RBP27.62■■■□□ 2.01
SHOX2-204ENST00000483851 DDX56Q9NY93 547 aaKnown RBP27.62■■■□□ 2.01
SHOX2-204ENST00000483851 PSMA2P25787 234 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 TAS2R40P59535 323 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 FAM102AQ5T9C2 384 aaPredicted RBP27.61■■■□□ 2.01
SHOX2-204ENST00000483851 EIF1ADQ8N9N8 165 aaKnown RBP27.61■■■□□ 2.01
SHOX2-204ENST00000483851 ZMYND15Q9H091 742 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 DDX43Q9NXZ2 648 aaKnown RBP27.61■■■□□ 2.01
SHOX2-204ENST00000483851 CDH9Q9ULB4 789 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 USTQ9Y2C2 406 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 M0QZQ0 153 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 B3GAT3O94766 335 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 PCSK1P29120 753 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 CHRNA3P32297 505 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 CYP1B1Q16678 543 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 C1orf53Q5VUE5 145 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 ARCQ7LC44 396 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 GSPT2Q8IYD1 628 aaKnown RBP27.61■■■□□ 2.01
SHOX2-204ENST00000483851 RCOR2Q8IZ40 523 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 JOSD2Q8TAC2 188 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 SLC2A14Q8TDB8 520 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 SEPT8Q92599 483 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 RBM41Q96IZ5 413 aaKnown RBP27.61■■■□□ 2.01
SHOX2-204ENST00000483851 TOX2Q96NM4 488 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 INPP5FQ9Y2H2 1132 aa27.61■■■□□ 2.01
SHOX2-204ENST00000483851 F8VP50 259 aa27.6■■■□□ 2.01
SHOX2-204ENST00000483851 NBNO60934 754 aa27.6■■■□□ 2.01
SHOX2-204ENST00000483851 CCDC130P13994 396 aa27.6■■■□□ 2.01
SHOX2-204ENST00000483851 PLCB3Q01970 1234 aa27.6■■■□□ 2.01
SHOX2-204ENST00000483851 TIGD5Q53EQ6 642 aa27.6■■■□□ 2.01
SHOX2-204ENST00000483851 OR6B2Q6IFH4 312 aa27.6■■■□□ 2.01
SHOX2-204ENST00000483851 METTL23Q86XA0 190 aa27.6■■■□□ 2.01
SHOX2-204ENST00000483851 RSPH1Q8WYR4 309 aa27.6■■■□□ 2.01
SHOX2-204ENST00000483851 DDX47Q9H0S4 455 aaKnown RBP27.6■■■□□ 2.01
SHOX2-204ENST00000483851 ACBD3Q9H3P7 528 aa27.6■■■□□ 2.01
SHOX2-204ENST00000483851 GDF3Q9NR23 364 aa27.6■■■□□ 2.01
SHOX2-204ENST00000483851 XPO1O14980 1071 aaKnown RBP27.59■■■□□ 2.01
SHOX2-204ENST00000483851 RAD51CO43502 376 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 HCRTO43612 131 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 PHF2O75151 1096 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 HEXIM1O94992 359 aaKnown RBP27.59■■■□□ 2.01
SHOX2-204ENST00000483851 ZNF143P52747 638 aaPredicted RBP27.59■■■□□ 2.01
SHOX2-204ENST00000483851 COPS2P61201 443 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 SLC6A3Q01959 620 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 DSC1Q08554 894 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 HADHQ16836 314 aaKnown RBP27.59■■■□□ 2.01
SHOX2-204ENST00000483851 NOMO2Q5JPE7 1267 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 AADACL2Q6P093 401 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 OLFML1Q6UWY5 402 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 FAM183BPQ6ZVS7 135 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.59■■■□□ 2.01
SHOX2-204ENST00000483851 NCAPGQ9BPX3 1015 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 PAAF1Q9BRP4 392 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 DUSP16Q9BY84 665 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 MED4Q9NPJ6 270 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 ASNSD1Q9NWL6 643 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.59■■■□□ 2.01
SHOX2-204ENST00000483851 KRT7P08729 469 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 ADORA2BP29275 332 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 SSR1P43307 286 aaKnown RBP27.59■■■□□ 2.01
SHOX2-204ENST00000483851 SLC7A5Q01650 507 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 DHX34Q14147 1143 aaKnown RBP27.59■■■□□ 2.01
SHOX2-204ENST00000483851 FUKQ8N0W3 1084 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 C12orf50Q8NA57 414 aaPredicted RBP27.59■■■□□ 2.01
SHOX2-204ENST00000483851 CNPY3Q9BT09 278 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 CACNG4Q9UBN1 327 aa27.59■■■□□ 2.01
SHOX2-204ENST00000483851 TMEM189-UBE2V1I3L0A0 370 aa27.58■■■□□ 2.01
SHOX2-204ENST00000483851 RNF8O76064 485 aa27.58■■■□□ 2.01
SHOX2-204ENST00000483851 GPNMBQ14956 572 aa27.58■■■□□ 2.01
SHOX2-204ENST00000483851 CD300LGQ6UXG3 332 aa27.58■■■□□ 2.01
SHOX2-204ENST00000483851 SLC39A5Q6ZMH5 540 aa27.58■■■□□ 2.01
SHOX2-204ENST00000483851 FAM71BQ8TC56 605 aa27.58■■■□□ 2.01
SHOX2-204ENST00000483851 SYT15Q9BQS2 421 aa27.58■■■□□ 2.01
SHOX2-204ENST00000483851 HOMER3Q9NSC5 361 aa27.58■■■□□ 2.01
SHOX2-204ENST00000483851 C2CD4BA6NLJ0 364 aa27.57■■■□□ 2
SHOX2-204ENST00000483851 DPYSL4O14531 572 aa27.57■■■□□ 2
SHOX2-204ENST00000483851 ENPP3O14638 875 aa27.57■■■□□ 2
SHOX2-204ENST00000483851 DESP17661 470 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms