RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 FAM183BPQ6ZVS7 135 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 PAQR9Q6ZVX9 377 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 ZDHHC17Q8IUH5 632 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 ARFGAP1Q8N6T3 406 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 EIF1ADQ8N9N8 165 aaKnown RBP14.8□□□□□ -0.04
CLK3-204ENST00000483723 C12orf50Q8NA57 414 aaPredicted RBP14.8□□□□□ -0.04
CLK3-204ENST00000483723 RNF169Q8NCN4 708 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 CCDC26Q8TAB7 109 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 HSFY1Q96LI6 401 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 FUT8Q9BYC5 575 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 CRISPLD2Q9H0B8 497 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 METTL5Q9NRN9 209 aaKnown RBP14.8□□□□□ -0.04
CLK3-204ENST00000483723 USTQ9Y2C2 406 aa14.8□□□□□ -0.04
CLK3-204ENST00000483723 GOLGA6L10A0A0M3HER8 536 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 M0QZQ0 153 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 MAP2K7O14733 419 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 PHF2O75151 1096 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 HEXIM1O94992 359 aaKnown RBP14.79□□□□□ -0.04
CLK3-204ENST00000483723 RARAP10276 462 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 CCDC130P13994 396 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 PSMA2P25787 234 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 MNX1P50219 401 aaPredicted RBP14.79□□□□□ -0.04
CLK3-204ENST00000483723 DCLRE1AQ6PJP8 1040 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 OLFML1Q6UWY5 402 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 DSTYKQ6XUX3 929 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 MAATS1Q7Z4T9 603 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 POLNQ7Z5Q5 900 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 IFT20Q8IY31 132 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 RCOR2Q8IZ40 523 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 FUKQ8N0W3 1084 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 MAIP1Q8WWC4 291 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 SEC14L1Q92503 715 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 RNF208Q9H0X6 261 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 ELAC1Q9H777 363 aaKnown RBP14.79□□□□□ -0.04
CLK3-204ENST00000483723 ST7Q9NRC1 585 aa14.79□□□□□ -0.04
CLK3-204ENST00000483723 TCRBV7S2A1N4TA0A589 114 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 C2CD4BA6NLJ0 364 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 ENPP3O14638 875 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 PAPSS1O43252 624 aaPredicted RBP14.78□□□□□ -0.04
CLK3-204ENST00000483723 ATP2C2O75185 946 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 MYBL2P10244 700 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 HSPA8P11142 646 aaKnown RBP14.78□□□□□ -0.04
CLK3-204ENST00000483723 TCF4P15884 667 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 TKTP29401 623 aaKnown RBP14.78□□□□□ -0.04
CLK3-204ENST00000483723 CHRNA3P32297 505 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 ACADSBP45954 432 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 PLA2G4AP47712 749 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 RGS7P49802 495 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 ZNF143P52747 638 aaPredicted RBP14.78□□□□□ -0.04
CLK3-204ENST00000483723 SLC6A3Q01959 620 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 DSC1Q08554 894 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 MAP9Q49MG5 647 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 CLLU1OSQ5K130 101 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 OR6B2Q6IFH4 312 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 ARCQ7LC44 396 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 ANKRD33Q7Z3H0 272 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 SLC2A14Q8TDB8 520 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 AENQ8WTP8 325 aaKnown RBP14.78□□□□□ -0.04
CLK3-204ENST00000483723 DUSP16Q9BY84 665 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 LRRC19Q9H756 370 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 EPB41L5Q9HCM4 733 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 DDX43Q9NXZ2 648 aaKnown RBP14.78□□□□□ -0.04
CLK3-204ENST00000483723 PCYOX1Q9UHG3 505 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 AMACRQ9UHK6 382 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 MTUS1Q9ULD2 1270 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 DPYSL4O14531 572 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 XPO1O14980 1071 aaKnown RBP14.78□□□□□ -0.04
CLK3-204ENST00000483723 LRCH4O75427 683 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 ADORA2BP29275 332 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 PTPN7P35236 360 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 PTGIRP43119 386 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 LBX1P52954 281 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 COPS2P61201 443 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 PLCB3Q01970 1234 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 KLF1Q13351 362 aaPredicted RBP14.78□□□□□ -0.04
CLK3-204ENST00000483723 ATP13A4Q4VNC1 1196 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 FAM102AQ5T9C2 384 aaPredicted RBP14.78□□□□□ -0.04
CLK3-204ENST00000483723 TRNP1Q6NT89 227 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 GLB1LQ6UWU2 654 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 ADAT2Q7Z6V5 191 aaKnown RBP14.78□□□□□ -0.04
CLK3-204ENST00000483723 EMC1Q8N766 993 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 HERPUD2Q9BSE4 406 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 CRTAC1Q9NQ79 661 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 TMEM161AQ9NX61 479 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 DDX56Q9NY93 547 aaKnown RBP14.78□□□□□ -0.04
CLK3-204ENST00000483723 KANSL3Q9P2N6 904 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 CDH9Q9ULB4 789 aa14.78□□□□□ -0.04
CLK3-204ENST00000483723 TSC2P49815 1807 aa14.77□□□□□ -0.04
CLK3-204ENST00000483723 FAM187AA6NFU0 413 aa14.77□□□□□ -0.05
CLK3-204ENST00000483723 TMEM189-UBE2V1I3L0A0 370 aa14.77□□□□□ -0.05
CLK3-204ENST00000483723 B3GAT3O94766 335 aa14.77□□□□□ -0.05
CLK3-204ENST00000483723 GPD1P21695 349 aa14.77□□□□□ -0.05
CLK3-204ENST00000483723 PCK1P35558 622 aa14.77□□□□□ -0.05
CLK3-204ENST00000483723 GUCY2DQ02846 1103 aa14.77□□□□□ -0.05
CLK3-204ENST00000483723 SLC25A11Q02978 314 aaKnown RBP14.77□□□□□ -0.05
CLK3-204ENST00000483723 DHX34Q14147 1143 aaKnown RBP14.77□□□□□ -0.05
CLK3-204ENST00000483723 NOMO2Q5JPE7 1267 aa14.77□□□□□ -0.05
CLK3-204ENST00000483723 TXNRD3NBQ6F5E7 133 aa14.77□□□□□ -0.05
CLK3-204ENST00000483723 SLC39A5Q6ZMH5 540 aa14.77□□□□□ -0.05
CLK3-204ENST00000483723 DBF4BQ8NFT6 615 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms