RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 FGD2Q7Z6J4 655 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 RTN4RL1Q86UN2 441 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-217ENST00000483442 CKAP2LQ8IYA6 745 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 ADSSL1Q8N142 457 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 MAGEB6Q8N7X4 407 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 HIPK4Q8NE63 616 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 REPS2Q8NFH8 660 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 ZNF483Q8TF39 744 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-217ENST00000483442 ERCC4Q92889 916 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-217ENST00000483442 CLIP3Q96DZ5 547 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 DNAJC2Q99543 621 aaKnown RBP4.22□□□□□ -1.73
LRCH3-217ENST00000483442 NUP88Q99567 741 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-217ENST00000483442 FSD1Q9BTV5 496 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 TEX13BQ9BXU2 312 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 PRKRIP1Q9H875 184 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-217ENST00000483442 RAVER2Q9HCJ3 691 aaKnown RBP4.22□□□□□ -1.73
LRCH3-217ENST00000483442 ALG13Q9NP73 1137 aaKnown RBP4.22□□□□□ -1.73
LRCH3-217ENST00000483442 MCM9Q9NXL9 1143 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 HDAC5Q9UQL6 1122 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 ROBO3Q96MS0 1386 aa4.22□□□□□ -1.73
LRCH3-217ENST00000483442 PTPRCP08575 1304 aa4.21□□□□□ -1.73
LRCH3-217ENST00000483442 USP34Q70CQ2 3546 aa4.21□□□□□ -1.73
LRCH3-217ENST00000483442 SPTBN4Q9H254 2564 aa4.21□□□□□ -1.73
LRCH3-217ENST00000483442 A0A0G2JMZ2 1700 aa4.21□□□□□ -1.73
LRCH3-217ENST00000483442 PRR23AA6NEV1 266 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 ASB14A6NK59 587 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 PROB1E7EW31 1015 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 H3BNC9 293 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 GSTA4O15217 222 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 CSPG5O95196 566 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 GJB5O95377 273 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 CYP2D6P10635 497 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 SDHAP31040 664 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 ADCY7P51828 1080 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 INHBCP55103 352 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 NANOS3P60323 173 aaKnown RBP4.21□□□□□ -1.74
LRCH3-217ENST00000483442 COL10A1Q03692 680 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 GPNMBQ14956 572 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 TCTN1Q2MV58 587 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 EPC2Q52LR7 807 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 TAPT1Q6NXT6 567 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.21□□□□□ -1.74
LRCH3-217ENST00000483442 DGLUCYQ7Z3D6 616 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 ADGRE4PQ86SQ3 457 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 RPAINQ86UA6 219 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 ZNF575Q86XF7 245 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 PRPF38AQ8NAV1 312 aaKnown RBP4.21□□□□□ -1.74
LRCH3-217ENST00000483442 GPHA2Q96T91 129 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 SLF1Q9BQI6 1058 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 CELF4Q9BZC1 486 aaKnown RBP4.21□□□□□ -1.74
LRCH3-217ENST00000483442 SH2D4AQ9H788 454 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 HOMER2Q9NSB8 354 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 GPRC5BQ9NZH0 403 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 GIT1Q9Y2X7 761 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 Q9Y3F1 56 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 ASB1Q9Y576 335 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 INSL6Q9Y581 213 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 TRIOO75962 3097 aa4.21□□□□□ -1.74
LRCH3-217ENST00000483442 PCSK5Q92824 1860 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 BRWD1Q9NSI6 2320 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 C5orf42Q9H799 3197 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 ABHD14A-ACY1A0A1B0GW23 586 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 PMS2P1A4D2B8 440 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 F5H6K3 240 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 DVL2O14641 736 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 NCK2O43639 380 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 NBNO60934 754 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 PDGFBP01127 241 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-217ENST00000483442 PURAQ00577 322 aaKnown RBP4.2□□□□□ -1.74
LRCH3-217ENST00000483442 KLRC3Q07444 240 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 SIGLEC14Q08ET2 396 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 HYAL1Q12794 435 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 SERINC3Q13530 473 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 PTGISQ16647 500 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 CERS3Q8IU89 383 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 FBXO16Q8IX29 292 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-217ENST00000483442 MYOCDQ8IZQ8 938 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 KCNG4Q8TDN1 519 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 SDR42E1Q8WUS8 393 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 SSH1Q8WYL5 1049 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 RABGGTAQ92696 567 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 NKD2Q969F2 451 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-217ENST00000483442 CHMP4CQ96CF2 233 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 RMDN1Q96DB5 314 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 RPGRIP1Q96KN7 1286 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 RPL10LQ96L21 214 aaKnown RBP4.2□□□□□ -1.74
LRCH3-217ENST00000483442 CCDC17Q96LX7 622 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 IPO9Q96P70 1041 aaKnown RBP4.2□□□□□ -1.74
LRCH3-217ENST00000483442 MTG1Q9BT17 334 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-217ENST00000483442 CCDC8Q9H0W5 538 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-217ENST00000483442 KANSL2Q9H9L4 492 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 MSL2Q9HCI7 577 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 FBXO40Q9UH90 709 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 CD207Q9UJ71 328 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 DMRT1Q9Y5R6 373 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 SIPA1L1O43166 1804 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 ZNF318Q5VUA4 2279 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 TECTAO75443 2155 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 CDK5RAP2Q96SN8 1893 aa4.2□□□□□ -1.74
LRCH3-217ENST00000483442 ZNF236Q9UL36 1845 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms