RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 MPLP40238 635 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 STAT6P42226 847 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 USP46P62068 366 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 FAM160A1Q05DH4 1040 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 EML3Q32P44 896 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 N4BP2L1Q5TBK1 243 aaPredicted RBP14.91□□□□□ -0.02
VARS-226ENST00000483275 STPG1Q5TH74 334 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 NT5DC4Q86YG4 428 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 CBWD2Q8IUF1 395 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 TMEM86AQ8N2M4 240 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 LRRC52Q8N7C0 313 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 PDILTQ8N807 584 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 OSCP1Q8WVF1 389 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 KBTBD7Q8WVZ9 684 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 TRMT2BQ96GJ1 504 aaKnown RBP14.91□□□□□ -0.02
VARS-226ENST00000483275 SYT15Q9BQS2 421 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 TPSD1Q9BZJ3 242 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 DUSP15Q9H1R2 295 aaPredicted RBP14.91□□□□□ -0.02
VARS-226ENST00000483275 ABCB6Q9NP58 842 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 CRTAC1Q9NQ79 661 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 FOXD4L1Q9NU39 408 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 PANK4Q9NVE7 773 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 SRPRBQ9Y5M8 271 aaKnown RBP14.91□□□□□ -0.02
VARS-226ENST00000483275 ZZEF1O43149 2961 aa14.91□□□□□ -0.02
VARS-226ENST00000483275 PDGFRBP09619 1106 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 USP17L7P0C7H9 530 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 ZNF806P0C7X5 589 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 GARTP22102 1010 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 BDNFP23560 247 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 TXLNAP40222 546 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 ZXDBP98169 803 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 DMC1Q14565 340 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 ZNF268Q14587 947 aaPredicted RBP14.9□□□□□ -0.02
VARS-226ENST00000483275 KCNB1Q14721 858 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 PLK5Q496M5 336 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 CACTINQ8WUQ7 758 aaKnown RBP14.9□□□□□ -0.02
VARS-226ENST00000483275 CD101Q93033 1021 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 ATP2A3Q93084 1043 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 CHAMP1Q96JM3 812 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 OLFML3Q9NRN5 406 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 GDAP2Q9NXN4 497 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 GCNT4Q9P109 453 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 ZMYM5Q9UJ78 669 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 NME7Q9Y5B8 376 aa14.9□□□□□ -0.02
VARS-226ENST00000483275 GABRDO14764 452 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 ATG13O75143 517 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 DRD1P21728 446 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 RBP5P82980 135 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 POU5F1Q01860 360 aaKnown RBP14.89□□□□□ -0.03
VARS-226ENST00000483275 CYP27A1Q02318 531 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 CREB5Q02930 508 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 MESP2Q0VG99 397 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 C2orf27AQ580R0 203 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 PLA2G2CQ5R387 149 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 TTC30AQ86WT1 665 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 GPD1LQ8N335 351 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 TOP6BLQ8N6T0 577 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 HPDLQ96IR7 371 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 MYRFLQ96LU7 910 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 USP28Q96RU2 1077 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 TMEM206Q9H813 350 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 TMEM30AQ9NV96 361 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 INTS13Q9NVM9 706 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 SMPD4Q9NXE4 827 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 UXTQ9UBK9 157 aaPredicted RBP14.89□□□□□ -0.03
VARS-226ENST00000483275 PCDHB13Q9Y5F0 798 aa14.89□□□□□ -0.03
VARS-226ENST00000483275 TNRC6BQ9UPQ9 1833 aaKnown RBP14.89□□□□□ -0.03
VARS-226ENST00000483275 FRMD3A2A2Y4 597 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 APBB3O95704 486 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 BCKDHBP21953 392 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 PCSK1P29120 753 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 GBP1P32455 592 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 HOXD13P35453 343 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 DGKEP52429 567 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 CACNA2D1P54289 1103 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 IFRD2Q12894 506 aaPredicted RBP14.88□□□□□ -0.03
VARS-226ENST00000483275 GAB4Q2WGN9 574 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 CFAP221Q4G0U5 840 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 MDH1BQ5I0G3 518 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 CCDC33Q8N5R6 958 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 ANKRD36BP1Q96IX9 119 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 LOXL4Q96JB6 756 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 MRPL45Q9BRJ2 306 aaKnown RBP14.88□□□□□ -0.03
VARS-226ENST00000483275 UPF2Q9HAU5 1272 aaKnown RBP14.88□□□□□ -0.03
VARS-226ENST00000483275 ZDHHC4Q9NPG8 344 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 RALYQ9UKM9 306 aaKnown RBP14.88□□□□□ -0.03
VARS-226ENST00000483275 GON4LQ3T8J9 2241 aa14.88□□□□□ -0.03
VARS-226ENST00000483275 MYH10P35580 1976 aa14.87□□□□□ -0.03
VARS-226ENST00000483275 CCDC163A0A0D9SF12 145 aa14.87□□□□□ -0.03
VARS-226ENST00000483275 LEFTY2O00292 366 aa14.87□□□□□ -0.03
VARS-226ENST00000483275 TM4SF5O14894 197 aa14.87□□□□□ -0.03
VARS-226ENST00000483275 GIPC1O14908 333 aa14.87□□□□□ -0.03
VARS-226ENST00000483275 LDHAP00338 332 aaKnown RBP14.87□□□□□ -0.03
VARS-226ENST00000483275 ABL1P00519 1130 aa14.87□□□□□ -0.03
VARS-226ENST00000483275 TNNC2P02585 160 aa14.87□□□□□ -0.03
VARS-226ENST00000483275 HDCP19113 662 aa14.87□□□□□ -0.03
VARS-226ENST00000483275 SYT1P21579 422 aa14.87□□□□□ -0.03
VARS-226ENST00000483275 GRIK1P39086 918 aa14.87□□□□□ -0.03
VARS-226ENST00000483275 OPRD1P41143 372 aa14.87□□□□□ -0.03
VARS-226ENST00000483275 LHX1P48742 406 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms