RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 ALLCQ8N6M5 410 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 HIPK4Q8NE63 616 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 ALKBH8Q96BT7 664 aaKnown RBP12.36□□□□□ -0.43
VTI1A-205ENST00000483122 PDGFDQ9GZP0 370 aaPredicted RBP12.36□□□□□ -0.43
VTI1A-205ENST00000483122 KCNK4Q9NYG8 393 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 UBAP1Q9NZ09 502 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 MARCOQ9UEW3 520 aaPredicted RBP12.36□□□□□ -0.43
VTI1A-205ENST00000483122 POLIQ9UNA4 740 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 SH3GLB1Q9Y371 365 aa12.36□□□□□ -0.43
VTI1A-205ENST00000483122 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.36□□□□□ -0.43
VTI1A-205ENST00000483122 NRXN2Q9P2S2 1712 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 IGKV6D-41A0A0C4DH26 115 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 BOLA2-SMG1P6H3BVE0 249 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 PDE5AO76074 875 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 PROSCO94903 275 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 MT-ND3P03897 115 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 LDHCP07864 332 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 C6orf222P0C671 652 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-205ENST00000483122 EEF2P13639 858 aaKnown RBP12.35□□□□□ -0.43
VTI1A-205ENST00000483122 ATP6V1B1P15313 513 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 MXI1P50539 228 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 SNAP25P60880 206 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 DCTN2Q13561 401 aaKnown RBP12.35□□□□□ -0.43
VTI1A-205ENST00000483122 HIC1Q14526 733 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 ZYXQ15942 572 aaKnown RBP12.35□□□□□ -0.43
VTI1A-205ENST00000483122 RALGPS1Q5JS13 557 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 ANKRD22Q5VYY1 191 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 PAOXQ6QHF9 649 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 TRIM67Q6ZTA4 783 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 PYROXD1Q8WU10 500 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 JDP2Q8WYK2 163 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 GPR101Q96P66 508 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-205ENST00000483122 ANKRD2Q9GZV1 360 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 ACSS3Q9H6R3 686 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 C17orf75Q9HAS0 396 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 TUBGCP4Q9UGJ1 667 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 LZTS1Q9Y250 596 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 ATP2A1O14983 1001 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 P4HA2O15460 535 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 EPHB1P54762 984 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 MFAP3P55082 362 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 BTKQ06187 659 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 PTP4A2Q12974 167 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 ALCAMQ13740 583 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 GRAMD1BQ3KR37 738 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 KLHL35Q6PF15 583 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 RHOT1Q8IXI2 618 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 TAB3Q8N5C8 712 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-205ENST00000483122 SLC35B4Q969S0 331 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 APOPT1Q96IL0 206 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 FAM20AQ96MK3 541 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 NYXQ9GZU5 481 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 TIMMDC1Q9NPL8 285 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 BTBD7Q9P203 1132 aa12.35□□□□□ -0.43
VTI1A-205ENST00000483122 CCDC195A0A1B0GUA6 201 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 CAPN8A6NHC0 703 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 IFNB1P01574 187 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 IL1BP01584 269 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 PMLP29590 882 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 SLC5A2P31639 672 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 PHBP35232 272 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 AQP5P55064 265 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 GPSM2P81274 684 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 XIAPP98170 497 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 HIF1AQ16665 826 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 MAP3K21Q5TCX8 1036 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 LRRC8BQ6P9F7 803 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 CDHR3Q6ZTQ4 885 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 STXBP4Q6ZWJ1 553 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 KATNAL2Q8IYT4 538 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 EFCAB3Q8N7B9 438 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 ATP11CQ8NB49 1132 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 FBXO36Q8NEA4 188 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 RIN3Q8TB24 985 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 PIP4K2CQ8TBX8 421 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 HELQQ8TDG4 1101 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 PRPF31Q8WWY3 499 aaKnown RBP12.34□□□□□ -0.43
VTI1A-205ENST00000483122 PPP1R14BQ96C90 147 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 ACAP3Q96P50 834 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 HSD17B14Q9BPX1 270 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 SENP6Q9GZR1 1112 aaPredicted RBP12.34□□□□□ -0.43
VTI1A-205ENST00000483122 INIPQ9NRY2 104 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 ZNF711Q9Y462 761 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 TELO2Q9Y4R8 837 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 NFASCO94856 1347 aa12.34□□□□□ -0.43
VTI1A-205ENST00000483122 GOLGA8IPA6NC78 632 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 GOLGA8JA6NMD2 632 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 PSTPIP1O43586 416 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 UNGP13051 313 aaPredicted RBP12.33□□□□□ -0.43
VTI1A-205ENST00000483122 TCF4P15884 667 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 RAG1P15918 1043 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 ATF7P17544 494 aaPredicted RBP12.33□□□□□ -0.43
VTI1A-205ENST00000483122 SERPINB8P50452 374 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 RHBDL3P58872 404 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 FAAP100Q0VG06 881 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 BST1Q10588 318 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 NFX1Q12986 1120 aaKnown RBP12.33□□□□□ -0.43
VTI1A-205ENST00000483122 SNAPC2Q13487 334 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 TSHZ1Q6ZSZ6 1077 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 SH2D5Q6ZV89 423 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms