RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 ZNF687Q8N1G0 1237 aa11.18□□□□□ -0.62
CPSF4-212ENST00000482251 CELF5Q8N6W0 485 aaKnown RBP11.18□□□□□ -0.62
CPSF4-212ENST00000482251 PARD3BQ8TEW8 1205 aa11.18□□□□□ -0.62
CPSF4-212ENST00000482251 SYAP1Q96A49 352 aaPredicted RBP11.18□□□□□ -0.62
CPSF4-212ENST00000482251 NELL2Q99435 816 aa11.18□□□□□ -0.62
CPSF4-212ENST00000482251 ZNF518BQ9C0D4 1074 aa11.18□□□□□ -0.62
CPSF4-212ENST00000482251 SCAND2PQ9GZW5 306 aaPredicted RBP11.18□□□□□ -0.62
CPSF4-212ENST00000482251 EBF3Q9H4W6 596 aa11.18□□□□□ -0.62
CPSF4-212ENST00000482251 MMRN2Q9H8L6 949 aa11.18□□□□□ -0.62
CPSF4-212ENST00000482251 LMAN1LQ9HAT1 526 aa11.18□□□□□ -0.62
CPSF4-212ENST00000482251 TMEM30AQ9NV96 361 aa11.18□□□□□ -0.62
CPSF4-212ENST00000482251 UXTQ9UBK9 157 aaPredicted RBP11.18□□□□□ -0.62
CPSF4-212ENST00000482251 F5P12259 2224 aa11.18□□□□□ -0.62
CPSF4-212ENST00000482251 GREB1Q4ZG55 1949 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 FAM237AA0A1B0GTK4 181 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 A0A1W2PQ27 194 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 A0A1W2PQ64 194 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 A0A1W2PQD8 194 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 F8VP50 259 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 TACC1O75410 805 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 ZNF202O95125 648 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 VNN1O95497 513 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 LMNAP02545 664 aaKnown RBP11.17□□□□□ -0.62
CPSF4-212ENST00000482251 CKMP06732 381 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 TRIM49P0CI25 452 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 TRIM49CP0CI26 452 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 DDX6P26196 483 aaKnown RBP eCLIP11.17□□□□□ -0.62
CPSF4-212ENST00000482251 PIK3CAP42336 1068 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 MAGEA9P43362 315 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 MAGEA11P43364 429 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 RPS9P46781 194 aaKnown RBP11.17□□□□□ -0.62
CPSF4-212ENST00000482251 SATB1Q01826 763 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 MAPRE1Q15691 268 aaKnown RBP11.17□□□□□ -0.62
CPSF4-212ENST00000482251 ZNF667Q5HYK9 610 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 SPOPLQ6IQ16 392 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 ARL14EPQ8N8R7 260 aaPredicted RBP11.17□□□□□ -0.62
CPSF4-212ENST00000482251 B3GALNT2Q8NCR0 500 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 MYCBPAPQ8TBZ2 947 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 CCDC47Q96A33 483 aaKnown RBP11.17□□□□□ -0.62
CPSF4-212ENST00000482251 TRMT2BQ96GJ1 504 aaKnown RBP11.17□□□□□ -0.62
CPSF4-212ENST00000482251 CYP2S1Q96SQ9 504 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 SDCBP2Q9H190 292 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 CHRDQ9H2X0 955 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 HPS4Q9NQG7 708 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 PRMT8Q9NR22 394 aaPredicted RBP11.17□□□□□ -0.62
CPSF4-212ENST00000482251 GKN1Q9NS71 199 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 TDP1Q9NUW8 608 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 DMAC2Q9NW81 257 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 THG1LQ9NWX6 298 aaKnown RBP11.17□□□□□ -0.62
CPSF4-212ENST00000482251 OBP2AQ9NY56 170 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 HMGXB4Q9UGU5 601 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 FANCMQ8IYD8 2048 aa11.17□□□□□ -0.62
CPSF4-212ENST00000482251 HELZP42694 1942 aaKnown RBP11.17□□□□□ -0.62
CPSF4-212ENST00000482251 RIF1Q5UIP0 2472 aaKnown RBP11.16□□□□□ -0.62
CPSF4-212ENST00000482251 ANAPC1Q9H1A4 1944 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 TRAV19A0A0A6YYK7 116 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 OTOL1A6NHN0 477 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-212ENST00000482251 PDXKO00764 312 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 SCAMP3O14828 347 aaKnown RBP11.16□□□□□ -0.62
CPSF4-212ENST00000482251 TRIM66O15016 1216 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 CALUO43852 315 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-212ENST00000482251 KINO60870 393 aaKnown RBP11.16□□□□□ -0.62
CPSF4-212ENST00000482251 RHOBTB3O94955 611 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 ABL1P00519 1130 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 C4BPAP04003 597 aaKnown RBP11.16□□□□□ -0.62
CPSF4-212ENST00000482251 MYL1P05976 194 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 CHRNB1P11230 501 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 PTPN1P18031 435 aaKnown RBP11.16□□□□□ -0.62
CPSF4-212ENST00000482251 NR2F2P24468 414 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 HOXC13P31276 330 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 ATICP31939 592 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 PLCB2Q00722 1185 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 PNOCQ13519 176 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 GAS6Q14393 721 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 BECN1Q14457 450 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 KCNB1Q14721 858 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 MTF1Q14872 753 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 ITPRIPL2Q3MIP1 535 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 NAIF1Q69YI7 327 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-212ENST00000482251 CC2D1AQ6P1N0 951 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-212ENST00000482251 VSTM1Q6UX27 236 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 DENND5BQ6ZUT9 1274 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 MON1AQ86VX9 555 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 SLC9A9Q8IVB4 645 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 ERCC4Q92889 916 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-212ENST00000482251 EEF2KMTQ96G04 330 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 MYRFLQ96LU7 910 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 MED10Q9BTT4 135 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 B3GNT5Q9BYG0 378 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 C8orf33Q9H7E9 229 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-212ENST00000482251 KIF9Q9HAQ2 790 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 C2orf42Q9NWW7 574 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 FBXO4Q9UKT5 387 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 FRMD4BQ9Y2L6 1034 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 WNT6Q9Y6F9 365 aa11.16□□□□□ -0.62
CPSF4-212ENST00000482251 AKAP3O75969 853 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 STAU1O95793 577 aaKnown RBP11.15□□□□□ -0.62
CPSF4-212ENST00000482251 HLA-DRAP01903 254 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 USP17L7P0C7H9 530 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 CCDC130P13994 396 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms