RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 LRRC3Q9BY71 257 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 OSBPL6Q9BZF3 934 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 KCTD10Q9H3F6 313 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 DPEP3Q9H4B8 488 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 TRPV4Q9HBA0 871 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 OBP2AQ9NY56 170 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 F8VP50 259 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 NRG2O14511 850 aaPredicted RBP11.95□□□□□ -0.5
SORT1-204ENST00000482236 PSMA7O14818 248 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 NOL4O94818 638 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 CD58P19256 250 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 ANP32AP39687 249 aaKnown RBP11.95□□□□□ -0.5
SORT1-204ENST00000482236 SOX9P48436 509 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 GCLMP48507 274 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 DLG4P78352 724 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 ITPRIPL2Q3MIP1 535 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 WDR44Q5JSH3 913 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 CPA6Q8N4T0 437 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 CXorf38Q8TB03 319 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 TAF4BQ92750 862 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 FBXO32Q969P5 355 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 JAKMIP2Q96AA8 810 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 SLC46A2Q9BY10 475 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 GTPBP4Q9BZE4 634 aaKnown RBP11.95□□□□□ -0.5
SORT1-204ENST00000482236 CRTAC1Q9NQ79 661 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 KRT82Q9NSB4 513 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 TDP1Q9NUW8 608 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 MTF2Q9Y483 593 aaPredicted RBP11.95□□□□□ -0.5
SORT1-204ENST00000482236 R4GN57 208 aa11.95□□□□□ -0.5
SORT1-204ENST00000482236 FAM237AA0A1B0GTK4 181 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 SPECC1L-ADORA2AF8WAN1 911 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 STAU1O95793 577 aaKnown RBP11.94□□□□□ -0.5
SORT1-204ENST00000482236 HLA-DRAP01903 254 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 GLULP15104 373 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 HDCP19113 662 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 ADORA2BP29275 332 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 MXI1P50539 228 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 CDH8P55286 799 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 ORC1Q13415 861 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 CCDC40Q4G0X9 1142 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 SCARA3Q6AZY7 606 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 ACOT1Q86TX2 421 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 MON1AQ86VX9 555 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 ZNF516Q92618 1163 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 SECISBP2LQ93073 1101 aaKnown RBP11.94□□□□□ -0.5
SORT1-204ENST00000482236 ELMO3Q96BJ8 720 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 TRMT2BQ96GJ1 504 aaKnown RBP11.94□□□□□ -0.5
SORT1-204ENST00000482236 SMARCD1Q96GM5 515 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 ZNF518BQ9C0D4 1074 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 LMAN1LQ9HAT1 526 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 IL21Q9HBE4 155 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 DMAP1Q9NPF5 467 aaPredicted RBP11.94□□□□□ -0.5
SORT1-204ENST00000482236 FAM49BQ9NUQ9 324 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 DUS2Q9NX74 493 aaKnown RBP11.94□□□□□ -0.5
SORT1-204ENST00000482236 GTSE1Q9NYZ3 720 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 RAB23Q9ULC3 237 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 TRAF3IP3Q9Y228 551 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 DOCK6Q96HP0 2047 aa11.94□□□□□ -0.5
SORT1-204ENST00000482236 CLDN5O00501 218 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 IKBKBO14920 756 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 AP1G2O75843 785 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 AKAP3O75969 853 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 RTN3O95197 1032 aaPredicted RBP11.93□□□□□ -0.5
SORT1-204ENST00000482236 F11P03951 625 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 FAM163BP0C2L3 166 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 SP9P0CG40 484 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 MBL2P11226 248 aaPredicted RBP11.93□□□□□ -0.5
SORT1-204ENST00000482236 HMGA1P17096 107 aaKnown RBP11.93□□□□□ -0.5
SORT1-204ENST00000482236 NBL1P41271 181 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 CCR3P51677 355 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 NOP14P78316 857 aaKnown RBP11.93□□□□□ -0.5
SORT1-204ENST00000482236 TNK2Q07912 1038 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 FCHO2Q0JRZ9 810 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 GRSF1Q12849 480 aaKnown RBP eCLIP11.93□□□□□ -0.5
SORT1-204ENST00000482236 NR1H3Q13133 447 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 MTF1Q14872 753 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 PON2Q15165 354 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 PDGFRLQ15198 375 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 EDRF1Q3B7T1 1238 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 ZACNQ401N2 412 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 ZNF658Q5TYW1 1059 aaPredicted RBP11.93□□□□□ -0.5
SORT1-204ENST00000482236 ISM2Q6H9L7 571 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 SPOPLQ6IQ16 392 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 KLHL10Q6JEL2 608 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 FAM171BQ6P995 826 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 SV2AQ7L0J3 742 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 FAM35AQ86V20 835 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 RALGPS2Q86X27 583 aaPredicted RBP11.93□□□□□ -0.5
SORT1-204ENST00000482236 ARL14EPQ8N8R7 260 aaPredicted RBP11.93□□□□□ -0.5
SORT1-204ENST00000482236 PDZD8Q8NEN9 1154 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 PLEKHO2Q8TD55 490 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 USP13Q92995 863 aaPredicted RBP11.93□□□□□ -0.5
SORT1-204ENST00000482236 ATP2A3Q93084 1043 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 RSPRY1Q96DX4 576 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 EEF2KMTQ96G04 330 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 SPATA17Q96L03 361 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 GSDMAQ96QA5 445 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 DDX23Q9BUQ8 820 aaKnown RBP11.93□□□□□ -0.5
SORT1-204ENST00000482236 EBF3Q9H4W6 596 aa11.93□□□□□ -0.5
SORT1-204ENST00000482236 TRPV5Q9NQA5 729 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms