RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 JOSD2Q8TAC2 188 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 AGAP11Q8TF27 550 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 N4BP2L2Q92802 583 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-218ENST00000482056 ERP27Q96DN0 273 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 BCO2Q9BYV7 579 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 CXorf56Q9H5V9 222 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 RSAD1Q9HA92 442 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 METTL5Q9NRN9 209 aaKnown RBP16.1■□□□□ 0.17
C9orf3-218ENST00000482056 ASNSD1Q9NWL6 643 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 ZMYND8Q9ULU4 1186 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-218ENST00000482056 POLIQ9UNA4 740 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 CLUHO75153 1309 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 IGKV6-21A0A0C4DH24 114 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 SOWAHBA6NEL2 793 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 FZD9O00144 591 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 TROVE2P10155 538 aaKnown RBP eCLIP16.09■□□□□ 0.17
C9orf3-218ENST00000482056 IBSPP21815 317 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-218ENST00000482056 MARK3P27448 753 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 RPL22P35268 128 aaKnown RBP16.09■□□□□ 0.17
C9orf3-218ENST00000482056 EIF3EP60228 445 aaKnown RBP16.09■□□□□ 0.17
C9orf3-218ENST00000482056 SLC1A5Q15758 541 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 PARP6Q2NL67 630 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 KCNT1Q5JUK3 1230 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 PLPPR4Q7Z2D5 763 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 NCAPG2Q86XI2 1143 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 XYLT1Q86Y38 959 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 LRRC71Q8N4P6 559 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 FBXO36Q8NEA4 188 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 ZNF398Q8TD17 642 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 INPP5DQ92835 1189 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 PAFAH2Q99487 392 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 MAK16Q9BXY0 300 aaKnown RBP16.09■□□□□ 0.17
C9orf3-218ENST00000482056 LRMDAQ9H2I8 198 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 SAE1Q9UBE0 346 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-218ENST00000482056 XPO7Q9UIA9 1087 aaKnown RBP16.09■□□□□ 0.17
C9orf3-218ENST00000482056 A0A1W2PPM1 405 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 INO80B-WBP1J3KQ70 363 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 LGR5O75473 907 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 P4HA1P13674 534 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 IL1R2P27930 398 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 GDF10P55107 478 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 OSTNP61366 133 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 BBS9Q3SYG4 887 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 FNBP1LQ5T0N5 605 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 ANKRD22Q5VYY1 191 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 ZNF75CPQ92670 426 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-218ENST00000482056 L3MBTL3Q96JM7 780 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-218ENST00000482056 DHRS4Q9BTZ2 278 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 INO80BQ9C086 356 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-218ENST00000482056 MIS12Q9H081 205 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 PTPRHQ9HD43 1115 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 IKBKGQ9Y6K9 419 aa16.09■□□□□ 0.17
C9orf3-218ENST00000482056 ANK1P16157 1881 aa16.08■□□□□ 0.17
C9orf3-218ENST00000482056 LTBP3Q9NS15 1303 aa16.08■□□□□ 0.17
C9orf3-218ENST00000482056 BANF1O75531 89 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 ANP32DO95626 131 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 SSTR1P30872 391 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 STIP1P31948 543 aaKnown RBP16.08■□□□□ 0.16
C9orf3-218ENST00000482056 RAD23BP54727 409 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 LY6KQ17RY6 165 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 CMASQ8NFW8 434 aaPredicted RBP16.08■□□□□ 0.16
C9orf3-218ENST00000482056 STAMBPL1Q96FJ0 436 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 CPXM1Q96SM3 734 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 CYTH2Q99418 400 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 SPATC1LQ9H0A9 340 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 FZD8Q9H461 694 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 CYP3A43Q9HB55 503 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 SLCO1B3Q9NPD5 702 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 GRID1Q9ULK0 1009 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 TRIM33Q9UPN9 1127 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 CHKBQ9Y259 395 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 C15orf41Q9Y2V0 281 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 A0A0G2JMZ2 1700 aa16.08■□□□□ 0.16
C9orf3-218ENST00000482056 IQANK1A0A1B0GTG1 560 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 HNRNPCL1O60812 293 aaKnown RBP16.07■□□□□ 0.16
C9orf3-218ENST00000482056 SPAG6O75602 509 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 TRUB2O95900 331 aaKnown RBP16.07■□□□□ 0.16
C9orf3-218ENST00000482056 RAP1GAPP47736 663 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 SLC26A2P50443 739 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 BASP1P80723 227 aaKnown RBP16.07■□□□□ 0.16
C9orf3-218ENST00000482056 ROR1Q01973 937 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 PTPN11Q06124 597 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-218ENST00000482056 TFDP2Q14188 446 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 FAM47CQ5HY64 1035 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 ARFGAP1Q8N6T3 406 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.07■□□□□ 0.16
C9orf3-218ENST00000482056 C10orf82Q8WW14 230 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 SPOCK2Q92563 424 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 HSPH1Q92598 858 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 NLRP4Q96MN2 994 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 TMEM237Q96Q45 408 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 GPR20Q99678 358 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 ADPGKQ9BRR6 497 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 CALN1Q9BXU9 219 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 BTBD7Q9P203 1132 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 PCSK1NQ9UHG2 260 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 CYTH4Q9UIA0 394 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 TNFSF13BQ9Y275 285 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 MT-ND3P03897 115 aa16.07■□□□□ 0.16
C9orf3-218ENST00000482056 ERBB2P04626 1255 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms