RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 FAM126BQ8IXS8 530 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 C12orf29Q8N999 325 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 B3GALNT2Q8NCR0 500 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 HDAC7Q8WUI4 952 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 SEC14L1Q92503 715 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 APBB2Q92870 758 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 CNPY3Q9BT09 278 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 FAM129AQ9BZQ8 928 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 DDX47Q9H0S4 455 aaKnown RBP12.32□□□□□ -0.44
GGPS1-205ENST00000482013 RAB17Q9H0T7 212 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 ACBD3Q9H3P7 528 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 LRRC19Q9H756 370 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 VIPAS39Q9H9C1 493 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 EPB41L5Q9HCM4 733 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 METTL5Q9NRN9 209 aaKnown RBP12.32□□□□□ -0.44
GGPS1-205ENST00000482013 FAM114A2Q9NRY5 505 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 RNF19AQ9NV58 838 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 OGFRQ9NZT2 677 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 FEZ2Q9UHY8 353 aaPredicted RBP12.32□□□□□ -0.44
GGPS1-205ENST00000482013 CDH9Q9ULB4 789 aa12.32□□□□□ -0.44
GGPS1-205ENST00000482013 UTP11Q9Y3A2 253 aaKnown RBP12.32□□□□□ -0.44
GGPS1-205ENST00000482013 E5RJQ4 531 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 F8VP50 259 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 M0QZQ0 153 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 XPO1O14980 1071 aaKnown RBP12.31□□□□□ -0.44
GGPS1-205ENST00000482013 SEC31AO94979 1220 aaKnown RBP12.31□□□□□ -0.44
GGPS1-205ENST00000482013 ODC1P11926 461 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 TYMPP19971 482 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 PCSK1P29120 753 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 GBP1P32455 592 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 PLA2G4AP47712 749 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 ZNF143P52747 638 aaPredicted RBP12.31□□□□□ -0.44
GGPS1-205ENST00000482013 SLC7A5Q01650 507 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 PLCB3Q01970 1234 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 OGDHQ02218 1023 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 GUCY2DQ02846 1103 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 PDE4CQ08493 712 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 SIX1Q15475 284 aaPredicted RBP12.31□□□□□ -0.44
GGPS1-205ENST00000482013 FAM102AQ5T9C2 384 aaPredicted RBP12.31□□□□□ -0.44
GGPS1-205ENST00000482013 WSCD1Q658N2 575 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 PMF1Q6P1K2 205 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 GLB1LQ6UWU2 654 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 SYDE1Q6ZW31 735 aaPredicted RBP12.31□□□□□ -0.44
GGPS1-205ENST00000482013 RTN4RL1Q86UN2 441 aaPredicted RBP12.31□□□□□ -0.44
GGPS1-205ENST00000482013 OSTM1Q86WC4 334 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 PRELID2Q8N945 189 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 JOSD2Q8TAC2 188 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 URGCPQ8TCY9 931 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 SH3TC2Q8TF17 1288 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 AENQ8WTP8 325 aaKnown RBP12.31□□□□□ -0.44
GGPS1-205ENST00000482013 KCTD13Q8WZ19 329 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 SLCO2A1Q92959 643 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 CAVIN3Q969G5 261 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 MAGOHBQ96A72 148 aaKnown RBP12.31□□□□□ -0.44
GGPS1-205ENST00000482013 DUSP16Q9BY84 665 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 UBXN6Q9BZV1 441 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 DPEP3Q9H4B8 488 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 ST7Q9NRC1 585 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 FAM49BQ9NUQ9 324 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 USTQ9Y2C2 406 aa12.31□□□□□ -0.44
GGPS1-205ENST00000482013 C2CD4BA6NLJ0 364 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 TMEM189-UBE2V1I3L0A0 370 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 GJB6O95452 261 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 RARAP10276 462 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 CCL5P13501 91 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 CAPN2P17655 700 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 GPD1P21695 349 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 COILP38432 576 aaPredicted RBP12.3□□□□□ -0.44
GGPS1-205ENST00000482013 SSR1P43307 286 aaKnown RBP12.3□□□□□ -0.44
GGPS1-205ENST00000482013 HTRA3P83110 453 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 DR1Q01658 176 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 MBTPS1Q14703 1052 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 CCNG2Q16589 344 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 PLEKHG4Q58EX7 1191 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 AADACL2Q6P093 401 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 OLFML1Q6UWY5 402 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 FAM183BPQ6ZVS7 135 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 SLC26A9Q7LBE3 791 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 GRK7Q8WTQ7 553 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 ACBD6Q9BR61 282 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 OSBPL8Q9BZF1 889 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 TMEM161AQ9NX61 479 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 DDX43Q9NXZ2 648 aaKnown RBP12.3□□□□□ -0.44
GGPS1-205ENST00000482013 TJP2Q9UDY2 1190 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 AMACRQ9UHK6 382 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 NR2E1Q9Y466 385 aa12.3□□□□□ -0.44
GGPS1-205ENST00000482013 HOXA2O43364 376 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 TJP3O95049 919 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 POMCP01189 267 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 PDGFRAP16234 1089 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 PTGIRP43119 386 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 PTPN9P43378 593 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 AFF1P51825 1210 aaKnown RBP12.29□□□□□ -0.44
GGPS1-205ENST00000482013 LMNB2Q03252 620 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 DSC1Q08554 894 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 GPS2Q13227 327 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 KLF1Q13351 362 aaPredicted RBP12.29□□□□□ -0.44
GGPS1-205ENST00000482013 MAPRE1Q15691 268 aaKnown RBP12.29□□□□□ -0.44
GGPS1-205ENST00000482013 TIGD5Q53EQ6 642 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 ODF2Q5BJF6 829 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms