RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 HEBP1Q9NRV9 189 aa12.16□□□□□ -0.46
RAPGEF1-207ENST00000481260 FAM49BQ9NUQ9 324 aa12.16□□□□□ -0.46
RAPGEF1-207ENST00000481260 MAGEC2Q9UBF1 373 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF1-207ENST00000481260 WNT16Q9UBV4 365 aa12.16□□□□□ -0.46
RAPGEF1-207ENST00000481260 ASB3Q9Y575 518 aa12.16□□□□□ -0.46
RAPGEF1-207ENST00000481260 C2orf78A6NCI8 922 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 ARNTLO00327 626 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 CALCAP01258 141 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 EPB41P11171 864 aaKnown RBP12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 GRIK1P39086 918 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 MAGEA11P43364 429 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 SOX9P48436 509 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 TNK2Q07912 1038 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 SLC44A4Q53GD3 710 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 WDR44Q5JSH3 913 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 FUKQ8N0W3 1084 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 LEMD2Q8NC56 503 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 ZMIZ2Q8NF64 920 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 SLC35C1Q96A29 364 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 BCO2Q9BYV7 579 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 MFSD1Q9H3U5 465 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 TASP1Q9H6P5 420 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 TRPV4Q9HBA0 871 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 TMEM8AQ9HCN3 771 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 LMBRD1Q9NUN5 540 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 FAM86C1Q9NVL1 165 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 HCN4Q9Y3Q4 1203 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 PTPRDP23468 1912 aa12.15□□□□□ -0.46
RAPGEF1-207ENST00000481260 COL4A2P08572 1712 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 SCAMP3O14828 347 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 PRKCSHP14314 528 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 MXI1P50539 228 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 RPL10AP62906 217 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 ZXDBP98169 803 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 FKBP3Q00688 224 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 SMARCB1Q12824 385 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 IFRD2Q12894 506 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 LRMPQ12912 555 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 GSE1Q14687 1217 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 MLF2Q15773 248 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 TAF12Q16514 161 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 TCERG1LQ5VWI1 586 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 NAIF1Q69YI7 327 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 C4orf50Q6ZRC1 276 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 GPRIN1Q7Z2K8 1008 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 FAM35AQ86V20 835 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 SCAMP5Q8TAC9 235 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 GPT2Q8TD30 523 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 SLC2A14Q8TDB8 520 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 KAT5Q92993 513 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 USP13Q92995 863 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 CCDC34Q96HJ3 373 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 DHTKD1Q96HY7 919 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 FUBP3Q96I24 572 aaKnown RBP eCLIP12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 MYRFLQ96LU7 910 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 TSG101Q99816 390 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 SMOQ99835 787 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 CLSTN2Q9H4D0 955 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 TRPC7Q9HCX4 862 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 KIAA1468Q9P260 1216 aa12.14□□□□□ -0.47
RAPGEF1-207ENST00000481260 OBSL1O75147 1896 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 OTOL1A6NHN0 477 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 STK25O00506 426 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 PSMA7O14818 248 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 SLC16A3O15427 465 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 CSH1P0DML2 217 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 CSH2P0DML3 217 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 AOC1P19801 751 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 ADORA2BP29275 332 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 HOXC13P31276 330 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 LRRC63Q05C16 580 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 ZNF394Q53GI3 561 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 KRT39Q6A163 491 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 TRIM68Q6AZZ1 485 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 TPRG1Q6ZUI0 275 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 MFSD6LQ8IWD5 586 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 CMTM8Q8IZV2 173 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 ZNF687Q8N1G0 1237 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 ARL14EPQ8N8R7 260 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 TTC16Q8NEE8 873 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 JAKMIP2Q96AA8 810 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 CHFRQ96EP1 664 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 MED10Q9BTT4 135 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 TRMT61BQ9BVS5 477 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 NIF3L1Q9GZT8 377 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 BRD9Q9H8M2 597 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 KRT82Q9NSB4 513 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 RAB20Q9NX57 234 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 GCNT4Q9P109 453 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 DLGAP2Q9P1A6 1054 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 HOOK1Q9UJC3 728 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 F5P12259 2224 aa12.13□□□□□ -0.47
RAPGEF1-207ENST00000481260 GREB1Q4ZG55 1949 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 H0Y858 1186 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 TNFRSF10BO14763 440 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 CILPO75339 1184 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 FAM163BP0C2L3 166 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 ARSAP15289 507 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 PSMC3P17980 439 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 TARSP26639 723 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms