RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	GRAMD1C	Q8IYS0	662 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	FAM109A	Q8N4B1	249 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	C8orf58	Q8NAV2	365 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	PRSS3P2	Q8NHM4	247 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	CYP2W1	Q8TAV3	490 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	ZCRB1	Q8TBF4	217 aa	Known RBP	4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	DDX17	Q92841	729 aa	Known RBP	4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	HOOK2	Q96ED9	719 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	SLC35A4	Q96G79	324 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	ASB2	Q96Q27	587 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	KLHL13	Q9P2N7	655 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	CPA4	Q9UI42	421 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	SERTAD3	Q9UJW9	196 aa		4.15	□□□□□ -1.75
CCNL1-223	ENST00000481173	SOCS2	O14508	198 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	BCAR3	O75815	825 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	UNC5C	O95185	931 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	PF4V1	P10720	104 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	PIM1	P11309	404 aa	Predicted RBP	4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	KCNJ5	P48544	419 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	SOX8	P57073	446 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	LILRA4	P59901	499 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	MIDN	Q504T8	468 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	KHDC1L	Q5JSQ8	128 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	TREML2	Q5T2D2	321 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	LCE1E	Q5T753	118 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	TEDDM1	Q5T9Z0	273 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	LAYN	Q6UX15	382 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	IRF2BP2	Q7Z5L9	587 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	PLBD2	Q8NHP8	589 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	BRIX1	Q8TDN6	353 aa	Known RBP	4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	FAM167A	Q96KS9	214 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	CGRRF1	Q99675	332 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	TMEM79	Q9BSE2	394 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	HESX1	Q9UBX0	185 aa		4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
CCNL1-223	ENST00000481173	PRR23D1	E9PI22	279 aa	Predicted RBP	4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	IL6R	P08887	468 aa	Predicted RBP	4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	AKAP5	P24588	427 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	NEK2	P51955	445 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	HOXA4	Q00056	320 aa	Predicted RBP	4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	ZNF267	Q14586	743 aa	Predicted RBP	4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	LONRF3	Q496Y0	759 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	AMOT	Q4VCS5	1084 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	ARHGAP40	Q5TG30	622 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	DTX2	Q86UW9	622 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	HPS3	Q969F9	1004 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	RITA1	Q96K30	269 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	NELL2	Q99435	816 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	MAP3K14	Q99558	947 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	SARS2	Q9NP81	518 aa	Known RBP	4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	DUSP22	Q9NRW4	184 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	WWOX	Q9NZC7	414 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	STAP2	Q9UGK3	403 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	SSX2IP	Q9Y2D8	614 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	ANKRD6	Q9Y2G4	727 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173	WDR17	Q8IZU2	1322 aa		4.13	□□□□□ -1.75
CCNL1-223	ENST00000481173		E5RJQ4	531 aa		4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	hCG_1984214	I3L0E3	225 aa		4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	AP1G1	O43747	822 aa		4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	IBSP	P21815	317 aa	Predicted RBP	4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	PDE1A	P54750	535 aa		4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	IQCB1	Q15051	598 aa		4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	ATAT1	Q5SQI0	421 aa		4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	IFIT1B	Q5T764	474 aa	Known RBP	4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	ICE2	Q659A1	982 aa		4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	FCRL6	Q6DN72	434 aa		4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	KIAA1161	Q6NSJ0	714 aa		4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	SHC4	Q6S5L8	630 aa		4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	TRIM72	Q6ZMU5	477 aa		4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	LRRC71	Q8N4P6	559 aa		4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	CDK5RAP3	Q96JB5	506 aa		4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	ZC3H10	Q96K80	434 aa	Known RBP	4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	MRPS17	Q9Y2R5	130 aa	Known RBP	4.12	□□□□□ -1.75
CCNL1-223	ENST00000481173	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	ANKRD62	A6NC57	917 aa		4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	CYSRT1	A8MQ03	144 aa		4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	ADAM10	O14672	748 aa		4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	SLC16A3	O15427	465 aa	Known RBP	4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	FES	P07332	822 aa		4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	GRP	P07492	148 aa		4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	CT47B1	P0C2W7	299 aa	Predicted RBP	4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	PXN	P49023	591 aa	Predicted RBP	4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	MEPCE	Q7L2J0	689 aa	Known RBP	4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	SMRP1	Q8NCR6	262 aa		4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	NSMCE1	Q8WV22	266 aa		4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	C1GALT1C1	Q96EU7	318 aa		4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	LRGUK	Q96M69	825 aa		4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	P2RX7	Q99572	595 aa	Known RBP	4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	PTDSS2	Q9BVG9	487 aa		4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	TCF7L1	Q9HCS4	588 aa		4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	XPR1	Q9UBH6	696 aa		4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	ADAMTS5	Q9UNA0	930 aa		4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	STXBP5L	Q9Y2K9	1186 aa		4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	NOP58	Q9Y2X3	529 aa	Known RBP	4.11	□□□□□ -1.75
CCNL1-223	ENST00000481173	TLR5	O60602	858 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	OFD1	O75665	1012 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	ALDH1L1	O75891	902 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms