RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 RTN3O95197 1032 aaPredicted RBP12.21□□□□□ -0.45
CCM2-213ENST00000480658 PAPSS2O95340 614 aaPredicted RBP12.21□□□□□ -0.45
CCM2-213ENST00000480658 SDHBP21912 280 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 ACAT1P24752 427 aaKnown RBP12.21□□□□□ -0.45
CCM2-213ENST00000480658 CYP2F1P24903 491 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 CTHP32929 405 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 CNR2P34972 360 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 PPP1R2P41236 205 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 CYP4F8P98187 520 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 FOXK2Q01167 660 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 GRSF1Q12849 480 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCM2-213ENST00000480658 NR1H3Q13133 447 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 NCOA4Q13772 614 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 FBXO43Q4G163 708 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 STXBP5Q5T5C0 1151 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 SCN4BQ8IWT1 228 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 TMEM130Q8N3G9 435 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 GUF1Q8N442 669 aaKnown RBP12.21□□□□□ -0.45
CCM2-213ENST00000480658 SPEM1Q8N4L4 309 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 CPA6Q8N4T0 437 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 MAB21L3Q8N8X9 362 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 B3GALNT2Q8NCR0 500 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 KIAA0895Q8NCT3 520 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 STKLD1Q8NE28 680 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 ST13P5Q8NFI4 369 aaPredicted RBP12.21□□□□□ -0.45
CCM2-213ENST00000480658 MYLPFQ96A32 169 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 PCED1BQ96HM7 432 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 KCTD10Q9H3F6 313 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 DMAC2Q9NW81 257 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 COMMD8Q9NX08 183 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 TRPM5Q9NZQ8 1165 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 RAB23Q9ULC3 237 aa12.21□□□□□ -0.45
CCM2-213ENST00000480658 NCANO14594 1321 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 SLC9A3R1O14745 358 aaPredicted RBP12.2□□□□□ -0.46
CCM2-213ENST00000480658 KLRC4O43908 158 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 FOXD2O60548 495 aaPredicted RBP12.2□□□□□ -0.46
CCM2-213ENST00000480658 SMC2O95347 1197 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 PRAMEF12O95522 483 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 NR2F2P24468 414 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 CCNE1P24864 410 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 GTF2H1P32780 548 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 PSMC2P35998 433 aaKnown RBP12.2□□□□□ -0.46
CCM2-213ENST00000480658 NDUFA8P51970 172 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 CSTF1Q05048 431 aaKnown RBP12.2□□□□□ -0.46
CCM2-213ENST00000480658 DDR2Q16832 855 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 EDRF1Q3B7T1 1238 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 TDRD10Q5VZ19 366 aaKnown RBP12.2□□□□□ -0.46
CCM2-213ENST00000480658 KRBA2Q6ZNG9 492 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 ASCL5Q7RTU5 278 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 UNC93AQ86WB7 457 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 ADSSL1Q8N142 457 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 ZBTB44Q8NCP5 570 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 RUBCNQ92622 972 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 SMARCD1Q96GM5 515 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 HINFPQ9BQA5 517 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 TTLL2Q9BWV7 592 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 SLC46A2Q9BY10 475 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 LMAN1LQ9HAT1 526 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 TMLHEQ9NVH6 421 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
CCM2-213ENST00000480658 ARHGAP26Q9UNA1 814 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 MYO15AQ9UKN7 3530 aa12.2□□□□□ -0.46
CCM2-213ENST00000480658 CACNA1HO95180 2353 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.19□□□□□ -0.46
CCM2-213ENST00000480658 LRRIQ3A6PVS8 624 aaPredicted RBP12.19□□□□□ -0.46
CCM2-213ENST00000480658 ZNF202O95125 648 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 NFATC1O95644 943 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 PTPN1P18031 435 aaKnown RBP12.19□□□□□ -0.46
CCM2-213ENST00000480658 DRD1P21728 446 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 CD72P21854 359 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 CXCL12P48061 93 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 PSMC1P62191 440 aaKnown RBP12.19□□□□□ -0.46
CCM2-213ENST00000480658 DPYDQ12882 1025 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 MTAPQ13126 283 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 RUNX3Q13761 415 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 MTF1Q14872 753 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 ZACNQ401N2 412 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 PREPLQ4J6C6 727 aaPredicted RBP12.19□□□□□ -0.46
CCM2-213ENST00000480658 CEP135Q66GS9 1140 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 TMEM150AQ86TG1 271 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 OSTM1Q86WC4 334 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 OSCP1Q8WVF1 389 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 NELL1Q92832 810 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 USP13Q92995 863 aaPredicted RBP12.19□□□□□ -0.46
CCM2-213ENST00000480658 GSDMAQ96QA5 445 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 TSG101Q99816 390 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 FAM83CQ9BQN1 747 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 XYLT2Q9H1B5 865 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 EPC1Q9H2F5 836 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 TRPC7Q9HCX4 862 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 DMAP1Q9NPF5 467 aaPredicted RBP12.19□□□□□ -0.46
CCM2-213ENST00000480658 MTF2Q9Y483 593 aaPredicted RBP12.19□□□□□ -0.46
CCM2-213ENST00000480658 USP34Q70CQ2 3546 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 TICRRQ7Z2Z1 1910 aa12.19□□□□□ -0.46
CCM2-213ENST00000480658 CST3P01034 146 aaPredicted RBP12.18□□□□□ -0.46
CCM2-213ENST00000480658 PDGFRBP09619 1106 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 CHRNB1P11230 501 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 HDCP19113 662 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 BDNFP23560 247 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 LMO2P25791 158 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms