RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CCDC169A6NNP5 214 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 PTGESO14684 152 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 HNRNPDLO14979 420 aaKnown RBP5.32□□□□□ -1.56
PTCD3-213ENST00000480102 MAPK13O15264 365 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 DTNBO60941 627 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 DDHD2O94830 711 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 KIF20AO95235 890 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 IL18RAPO95256 599 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 SPINK2P20155 84 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 BMP6P22004 513 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 FGFR4P22455 802 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 MLH1P40692 756 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 PPP1R2P41236 205 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 ME1P48163 572 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 SLC11A1P49279 550 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 AP3M2P53677 418 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 TAGLNQ01995 201 aaKnown RBP5.32□□□□□ -1.56
PTCD3-213ENST00000480102 GRIN1Q05586 938 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 RNASELQ05823 741 aaKnown RBP5.32□□□□□ -1.56
PTCD3-213ENST00000480102 SMARCB1Q12824 385 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 KCNB1Q14721 858 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 SURF1Q15526 300 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 PTPN14Q15678 1187 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 UPP1Q16831 310 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 USP41Q3LFD5 358 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 ZNF568Q3ZCX4 644 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 TCEAL5Q5H9L2 206 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 SEZ6L2Q6UXD5 910 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.32□□□□□ -1.56
PTCD3-213ENST00000480102 USP49Q70CQ1 688 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 VPS52Q8N1B4 723 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 MYCT1Q8N699 235 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 RASSF8Q8NHQ8 419 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 SPATA20Q8TB22 786 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 ZNF507Q8TCN5 953 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 GPBAR1Q8TDU6 330 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 CEP295NLQ96MC4 621 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 FAM193BQ96PV7 902 aaPredicted RBP5.32□□□□□ -1.56
PTCD3-213ENST00000480102 ACCSQ96QU6 501 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 TCF25Q9BQ70 676 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 TARS2Q9BW92 718 aaKnown RBP5.32□□□□□ -1.56
PTCD3-213ENST00000480102 EIF2AQ9BY44 585 aaKnown RBP5.32□□□□□ -1.56
PTCD3-213ENST00000480102 ADAM7Q9H2U9 754 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 PIDD1Q9HB75 910 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 CBX8Q9HC52 389 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 MRPL17Q9NRX2 175 aaKnown RBP5.32□□□□□ -1.56
PTCD3-213ENST00000480102 MARCH5Q9NX47 278 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 ZDHHC7Q9NXF8 308 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 KCNH3Q9ULD8 1083 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 UBQLN1Q9UMX0 589 aaKnown RBP5.32□□□□□ -1.56
PTCD3-213ENST00000480102 TET1Q8NFU7 2136 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 A0A087X0B3 334 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 ANO9A1A5B4 782 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 MEIS3P2A8K0S8 358 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 M0QZQ0 153 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 SLC16A4O15374 487 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 TBC1D4O60343 1298 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 ZC3H11AO75152 810 aaKnown RBP eCLIP5.31□□□□□ -1.56
PTCD3-213ENST00000480102 RHOBTB3O94955 611 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 OAZ2O95190 189 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 NPTXRO95502 500 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 EDN1P05305 212 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 KRT18P05783 430 aaKnown RBP5.31□□□□□ -1.56
PTCD3-213ENST00000480102 URODP06132 367 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 CELA3AP09093 270 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 HNRNPA1P09651 372 aaKnown RBP eCLIP5.31□□□□□ -1.56
PTCD3-213ENST00000480102 TYMPP19971 482 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 DNAJB1P25685 340 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 ADSSP30520 456 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 PNPLA4P41247 253 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 GLUD2P49448 558 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 NDUFV1P49821 464 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 LIG4P49917 911 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 GATMP50440 423 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 SCNN1GP51170 649 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 ERVFC1P60507 584 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 RAB33AQ14088 237 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 MRPL58Q14197 206 aaKnown RBP5.31□□□□□ -1.56
PTCD3-213ENST00000480102 SLC10A6Q3KNW5 377 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 SPATA1Q5VX52 437 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 EEF1DP3Q658K8 133 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 TPGS2Q68CL5 300 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 FUT10Q6P4F1 479 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 FAM173BQ6P4H8 233 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 LILRA6Q6PI73 481 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 ANKS3Q6ZW76 656 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 DPH6Q7L8W6 267 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 DTX1Q86Y01 620 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 ZNF280BQ86YH2 543 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 ADHFE1Q8IWW8 467 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 APPL2Q8NEU8 664 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 SLC22A17Q8WUG5 538 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 CPB2Q96IY4 423 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 SPATA32Q96LK8 384 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 CLIC6Q96NY7 704 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 PPP1R16BQ96T49 567 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 DUSP9Q99956 384 aaKnown RBP5.31□□□□□ -1.56
PTCD3-213ENST00000480102 TTPALQ9BTX7 342 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 GBP3Q9H0R5 595 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 S1PR5Q9H228 398 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms