RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TAS2R40P59535 323 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 RNASE9P60153 205 aaKnown RBP11.6□□□□□ -0.55
VTI1A-204ENST00000480057 PLCB3Q01970 1234 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 OGDHQ02218 1023 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 PDE4CQ08493 712 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 NNTQ13423 1086 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 CUL1Q13616 776 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 PLEKHG4Q58EX7 1191 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 C1orf53Q5VUE5 145 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 WSCD1Q658N2 575 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 OLFML1Q6UWY5 402 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 HDXQ7Z353 690 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 ANKRD33Q7Z3H0 272 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 PHLDB2Q86SQ0 1253 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 RTN4RL1Q86UN2 441 aaPredicted RBP11.6□□□□□ -0.55
VTI1A-204ENST00000480057 CPNE8Q86YQ8 564 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 KLHL7Q8IXQ5 586 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 KCTD13Q8WZ19 329 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 SEC14L1Q92503 715 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 SEPT8Q92599 483 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 SLCO2A1Q92959 643 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 DEFB118Q96PH6 123 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 CNPY3Q9BT09 278 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 AP1M1Q9BXS5 423 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 DUSP16Q9BY84 665 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 UBXN6Q9BZV1 441 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 RAB17Q9H0T7 212 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 DPEP3Q9H4B8 488 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 LRRC19Q9H756 370 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 METTL5Q9NRN9 209 aaKnown RBP11.6□□□□□ -0.55
VTI1A-204ENST00000480057 FAM49BQ9NUQ9 324 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 RNF19AQ9NV58 838 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 ZNF446Q9NWS9 450 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 PCYOX1Q9UHG3 505 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 DMGDHQ9UI17 866 aaKnown RBP11.6□□□□□ -0.55
VTI1A-204ENST00000480057 EFR3BQ9Y2G0 817 aa11.6□□□□□ -0.55
VTI1A-204ENST00000480057 TANC1Q9C0D5 1861 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 TSC2P49815 1807 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 C2CD4BA6NLJ0 364 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 GOLGA8SH3BPF8 625 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 HOXA2O43364 376 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 RNF8O76064 485 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 PDGFRBP09619 1106 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 GPD1P21695 349 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 LMO2P25791 158 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 EPHB4P54760 987 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 SLC6A3Q01959 620 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 DSC1Q08554 894 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 SIX1Q15475 284 aaPredicted RBP11.59□□□□□ -0.55
VTI1A-204ENST00000480057 NOMO2Q5JPE7 1267 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 FAM102AQ5T9C2 384 aaPredicted RBP11.59□□□□□ -0.55
VTI1A-204ENST00000480057 OR6B2Q6IFH4 312 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 PMF1Q6P1K2 205 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 EMBQ6PCB8 327 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 FAM183BPQ6ZVS7 135 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 SLC26A9Q7LBE3 791 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 METTL23Q86XA0 190 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 PRELID2Q8N945 189 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 RNF169Q8NCN4 708 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 JOSD2Q8TAC2 188 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 AENQ8WTP8 325 aaKnown RBP11.59□□□□□ -0.55
VTI1A-204ENST00000480057 HDAC7Q8WUI4 952 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 LINC01599Q8WXQ3 324 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 SUSD3Q96L08 255 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 TOX2Q96NM4 488 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 SYT15Q9BQS2 421 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 ACBD6Q9BR61 282 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 DDX47Q9H0S4 455 aaKnown RBP11.59□□□□□ -0.55
VTI1A-204ENST00000480057 RNF208Q9H0X6 261 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 VIPAS39Q9H9C1 493 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 ST7Q9NRC1 585 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 DDX43Q9NXZ2 648 aaKnown RBP11.59□□□□□ -0.55
VTI1A-204ENST00000480057 TJP2Q9UDY2 1190 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 FEZ2Q9UHY8 353 aaPredicted RBP11.59□□□□□ -0.55
VTI1A-204ENST00000480057 RASAL2Q9UJF2 1139 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 USTQ9Y2C2 406 aa11.59□□□□□ -0.55
VTI1A-204ENST00000480057 CASTOR2A6NHX0 329 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 F8VP50 259 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 LRCH4O75427 683 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 B3GAT3O94766 335 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 GJB6O95452 261 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 POMCP01189 267 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 CXCL10P02778 98 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 GLI1P08151 1106 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 CCDC130P13994 396 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 NPR3P17342 541 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 AFF1P51825 1210 aaKnown RBP11.58□□□□□ -0.56
VTI1A-204ENST00000480057 DRG2P55039 364 aaKnown RBP11.58□□□□□ -0.56
VTI1A-204ENST00000480057 DR1Q01658 176 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 SLC25A11Q02978 314 aaKnown RBP11.58□□□□□ -0.56
VTI1A-204ENST00000480057 KLF1Q13351 362 aaPredicted RBP11.58□□□□□ -0.56
VTI1A-204ENST00000480057 MAPRE1Q15691 268 aaKnown RBP11.58□□□□□ -0.56
VTI1A-204ENST00000480057 TIGD5Q53EQ6 642 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 CD300LGQ6UXG3 332 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 SYDE1Q6ZW31 735 aaPredicted RBP11.58□□□□□ -0.56
VTI1A-204ENST00000480057 VSIG1Q86XK7 387 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 FUKQ8N0W3 1084 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 C3orf58Q8NDZ4 430 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 SLC2A14Q8TDB8 520 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 CAVIN3Q969G5 261 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms