RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 INTS6LQ5JSJ4 861 aaKnown RBP17.29■□□□□ 0.36
DDX56-210ENST00000479440 LYSMD4Q5XG99 296 aa17.29■□□□□ 0.36
DDX56-210ENST00000479440 SLFN12LQ6IEE8 588 aa17.29■□□□□ 0.36
DDX56-210ENST00000479440 ARMCX6Q7L4S7 300 aa17.29■□□□□ 0.36
DDX56-210ENST00000479440 GPBP1Q86WP2 473 aa17.29■□□□□ 0.36
DDX56-210ENST00000479440 ARL14EPQ8N8R7 260 aaPredicted RBP17.29■□□□□ 0.36
DDX56-210ENST00000479440 SPATA18Q8TC71 538 aa17.29■□□□□ 0.36
DDX56-210ENST00000479440 SLC22A12Q96S37 553 aa17.29■□□□□ 0.36
DDX56-210ENST00000479440 ACBD6Q9BR61 282 aa17.29■□□□□ 0.36
DDX56-210ENST00000479440 DDX43Q9NXZ2 648 aaKnown RBP17.29■□□□□ 0.36
DDX56-210ENST00000479440 BCCIPQ9P287 314 aaKnown RBP eCLIP17.29■□□□□ 0.36
DDX56-210ENST00000479440 SPAARA0A1B0GVQ0 90 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 SLC26A4O43511 780 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 TBCAO75347 108 aaKnown RBP17.28■□□□□ 0.36
DDX56-210ENST00000479440 IL18RAPO95256 599 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 PFKLP17858 780 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 CYP2F1P24903 491 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 ZNF131P52739 623 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 ATP2C1P98194 919 aaPredicted RBP17.28■□□□□ 0.36
DDX56-210ENST00000479440 CFAP221Q4G0U5 840 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 SLC23A3Q6PIS1 610 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 PIP4P1Q86T03 277 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 SPATA2LQ8IUW3 424 aaPredicted RBP17.28■□□□□ 0.36
DDX56-210ENST00000479440 TMEM86AQ8N2M4 240 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 PDCL2Q8N4E4 241 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 CCDC33Q8N5R6 958 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 FUBP3Q96I24 572 aaKnown RBP eCLIP17.28■□□□□ 0.36
DDX56-210ENST00000479440 CYP2S1Q96SQ9 504 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 ZHX3Q9H4I2 956 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 GCNT4Q9P109 453 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 AGO2Q9UKV8 859 aaKnown RBP17.28■□□□□ 0.36
DDX56-210ENST00000479440 THADAQ6YHU6 1953 aa17.28■□□□□ 0.36
DDX56-210ENST00000479440 LAMA1P25391 3075 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 IGF2RP11717 2491 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 ATXN2Q99700 1313 aaKnown RBP17.27■□□□□ 0.36
DDX56-210ENST00000479440 ATG2BQ96BY7 2078 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 VWA3AA6NCI4 1184 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 C2orf78A6NCI8 922 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 TAF4O00268 1085 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 EIF5BO60841 1220 aaKnown RBP17.27■□□□□ 0.36
DDX56-210ENST00000479440 HUS1O60921 280 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 CFIP05156 583 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 KRT18P05783 430 aaKnown RBP17.27■□□□□ 0.36
DDX56-210ENST00000479440 SEMA3BQ13214 749 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 HNRNPDQ14103 355 aaKnown RBP17.27■□□□□ 0.36
DDX56-210ENST00000479440 RILPL1Q5EBL4 403 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 EOGTQ5NDL2 527 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 PEAR1Q5VY43 1037 aaPredicted RBP17.27■□□□□ 0.36
DDX56-210ENST00000479440 RABEPKQ7Z6M1 372 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 TMEFF1Q8IYR6 380 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 KIAA1958Q8N8K9 716 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 CEP76Q8TAP6 659 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 FNBP1Q96RU3 617 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 L1RE1Q9UN81 338 aa17.27■□□□□ 0.36
DDX56-210ENST00000479440 SCN1AP35498 2009 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 HELZP42694 1942 aaKnown RBP17.26■□□□□ 0.35
DDX56-210ENST00000479440 MYMKA6NI61 221 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 AP5Z1O43299 807 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 OPHN1O60890 802 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 KLF8O95600 359 aaPredicted RBP17.26■□□□□ 0.35
DDX56-210ENST00000479440 APODP05090 189 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 CYP17A1P05093 508 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 HDCP19113 662 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 ACAT1P24752 427 aaKnown RBP17.26■□□□□ 0.35
DDX56-210ENST00000479440 PCSK1P29120 753 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 EIF2DP41214 584 aaKnown RBP17.26■□□□□ 0.35
DDX56-210ENST00000479440 PTGER3P43115 390 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 GTF2BQ00403 316 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 ZNF423Q2M1K9 1284 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 ZC2HC1CQ53FD0 456 aaPredicted RBP17.26■□□□□ 0.35
DDX56-210ENST00000479440 TMEM92Q6UXU6 159 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 PROSER1Q86XN7 944 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 SCN4BQ8IWT1 228 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 ALLCQ8N6M5 410 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 TXNDC5Q8NBS9 432 aaKnown RBP17.26■□□□□ 0.35
DDX56-210ENST00000479440 RLN3Q8WXF3 142 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 CALML4Q96GE6 196 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 GTPBP2Q9BX10 602 aaKnown RBP17.26■□□□□ 0.35
DDX56-210ENST00000479440 LINC00597Q9H2U6 94 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 STYXL1Q9Y6J8 313 aa17.26■□□□□ 0.35
DDX56-210ENST00000479440 TNRC6BQ9UPQ9 1833 aaKnown RBP17.26■□□□□ 0.35
DDX56-210ENST00000479440 ZZEF1O43149 2961 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.25■□□□□ 0.35
DDX56-210ENST00000479440 ANKRD63C9JTQ0 380 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 LEFTY2O00292 366 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 SLC9A3R1O14745 358 aaPredicted RBP17.25■□□□□ 0.35
DDX56-210ENST00000479440 POLR2BP30876 1174 aaKnown RBP17.25■□□□□ 0.35
DDX56-210ENST00000479440 RESTQ13127 1097 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 DUOXA1Q1HG43 343 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 ARL6IP4Q66PJ3 421 aaKnown RBP17.25■□□□□ 0.35
DDX56-210ENST00000479440 C4orf50Q6ZRC1 276 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 ADGRF2Q8IZF7 708 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 PGBD3Q8N328 593 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 LRRC52Q8N7C0 313 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 IL17RCQ8NAC3 791 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 HMGB4Q8WW32 186 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 POMGNT1Q8WZA1 660 aa17.25■□□□□ 0.35
DDX56-210ENST00000479440 ZSCAN31Q96LW9 406 aaPredicted RBP17.25■□□□□ 0.35
DDX56-210ENST00000479440 AK8Q96MA6 479 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms