RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 APIPQ96GX9 242 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 ZNF778Q96MU6 729 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 MYH16Q9H6N6 1097 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 ZMAT3Q9HA38 289 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 SIDT1Q9NXL6 827 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 JKAMPQ9P055 326 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 ABCF2Q9UG63 623 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 SLC45A2Q9UMX9 530 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 PCDHGB6Q9Y5F9 930 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 KIAA0556O60303 1618 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 ADCY10Q96PN6 1610 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 KIAA0586Q9BVV6 1533 aa4.97□□□□□ -1.61
CDC42BPA-212ENST00000478573 COL3A1P02461 1466 aaPredicted RBP4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 LOC102724159A0A0B4J2E5 919 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 WDR91A4D1P6 747 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 CFAP69A5D8W1 941 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 FOXN3O00409 490 aaPredicted RBP4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 MYF5P13349 255 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 SMARCA1P28370 1054 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 PRDX5P30044 214 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 PTPRRQ15256 657 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 PWP2Q15269 919 aaKnown RBP4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 FLYWCH1Q4VC44 716 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 GORABQ5T7V8 394 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 EMC10Q5UCC4 262 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 ZNF365Q70YC5 407 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 MORC1Q86VD1 984 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 COL23A1Q86Y22 540 aaPredicted RBP4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 RASAL3Q86YV0 1011 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 CFAP52Q8N1V2 620 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 IL31RAQ8NI17 732 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 HASPINQ8TF76 798 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 NT5C1BQ96P26 610 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 HAPLN3Q96S86 360 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 LRRC27Q9C0I9 530 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 ARMT1Q9H993 441 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 KIF21BO75037 1637 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 MAPKBP1O60336 1514 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 UGGT2Q9NYU1 1516 aa4.96□□□□□ -1.62
CDC42BPA-212ENST00000478573 ISM1B1AKI9 464 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 MYO1FO00160 1098 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 F2RL2O00254 374 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 WT1P19544 449 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 NPTX2P47972 431 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 IFIT5Q13325 482 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 EZH2Q15910 746 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 TMEM119Q4V9L6 283 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 TAPT1Q6NXT6 567 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 SLC30A10Q6XR72 485 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 MICALCLQ6ZW33 695 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 EXOC8Q8IYI6 725 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 IL17RDQ8NFM7 739 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 DPF1Q92782 380 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 PHKBQ93100 1093 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 ZC3H10Q96K80 434 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 TNIP3Q96KP6 325 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 MRGPRX1Q96LB2 322 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 TRIB1Q96RU8 372 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 SMOQ99835 787 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 MYD88Q99836 296 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 MRPL46Q9H2W6 279 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 NLRC4Q9NPP4 1024 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 GNL3LQ9NVN8 582 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 TAGLN3Q9UI15 199 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 TPCN1Q9ULQ1 816 aa4.95□□□□□ -1.62
CDC42BPA-212ENST00000478573 A0A1W2PPL8 197 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 SLC43A1O75387 559 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 URI1O94763 535 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 PRKCGP05129 697 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 RHOP08100 348 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 NR2F6P10588 404 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 SERPINB3P29508 390 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 HNRNPMP52272 730 aaKnown RBP eCLIP4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 ARFIP2P53365 341 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 ITIH3Q06033 890 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 LONRF1Q17RB8 773 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 FCRLBQ6BAA4 426 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 DPP9Q86TI2 863 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 PPP1R3BQ86XI6 285 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 FAM186BQ8IYM0 893 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 BRIX1Q8TDN6 353 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 PARD3BQ8TEW8 1205 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 SARS2Q9NP81 518 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 ZDHHC8Q9ULC8 765 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 PADI4Q9UM07 663 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 SAMD9Q5K651 1589 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 DIP2BQ9P265 1576 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 RAPGEF2Q9Y4G8 1499 aa4.94□□□□□ -1.62
CDC42BPA-212ENST00000478573 WIPF3A6NGB9 483 aa4.93□□□□□ -1.62
CDC42BPA-212ENST00000478573 VWC2LB2RUY7 222 aa4.93□□□□□ -1.62
CDC42BPA-212ENST00000478573 RASA4BC9J798 803 aa4.93□□□□□ -1.62
CDC42BPA-212ENST00000478573 F5H697 171 aa4.93□□□□□ -1.62
CDC42BPA-212ENST00000478573 POLRMTO00411 1230 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-212ENST00000478573 IFRD1O00458 451 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-212ENST00000478573 RASA4O43374 803 aa4.93□□□□□ -1.62
CDC42BPA-212ENST00000478573 TTLL1O95922 423 aa4.93□□□□□ -1.62
CDC42BPA-212ENST00000478573 MYL3P08590 195 aa4.93□□□□□ -1.62
CDC42BPA-212ENST00000478573 EBLN1P0CF75 366 aa4.93□□□□□ -1.62
CDC42BPA-212ENST00000478573 NPR1P16066 1061 aa4.93□□□□□ -1.62
CDC42BPA-212ENST00000478573 ZKSCAN1P17029 563 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms