RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 SSX2IPQ9Y2D8 614 aa4.35□□□□□ -1.71
NCKAP1-204ENST00000477988 FZD9O00144 591 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 SMAD6O43541 496 aaKnown RBP4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 EXOC3O60645 756 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 ATXN1LP0C7T5 689 aaKnown RBP4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 HTR6P50406 440 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 DSC2Q02487 901 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 INAVAQ3KP66 663 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 PGM2L1Q6PCE3 622 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 LAYNQ6UX15 382 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 SERPINA13PQ6UXR4 307 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 DEF8Q6ZN54 512 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 C3orf20Q8ND61 904 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 ZNF398Q8TD17 642 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 ATG4AQ8WYN0 398 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 GLG1Q92896 1179 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 FYTTD1Q96QD9 318 aaKnown RBP4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 HIPK2Q9H2X6 1198 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 WDCPQ9H6R7 721 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 SLAMF7Q9NQ25 335 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 MKS1Q9NXB0 559 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 TFCP2L1Q9NZI6 479 aa4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 CCNL1Q9UK58 526 aaPredicted RBP4.34□□□□□ -1.71
NCKAP1-204ENST00000477988 ZMYM2Q9UBW7 1377 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 KLHL33A6NCF5 533 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 TMEM232C9JQI7 657 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 M0QYG6 137 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 PRKCBP05771 671 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 MASP1P48740 699 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 RENBPP51606 427 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 SP2Q02086 613 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 ACAP2Q15057 778 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 ZNF628Q5EBL2 1059 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 LVRNQ6Q4G3 990 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 PIP4P1Q86T03 277 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 C1orf162Q8NEQ5 155 aaPredicted RBP4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 ADAMTS18Q8TE60 1221 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 XAGE5Q8WWM1 108 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 THOC3Q96J01 351 aaKnown RBP4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 SLC46A1Q96NT5 459 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 CTAGE1Q96RT6 745 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 C1orf43Q9BWL3 253 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 MDFICQ9P1T7 246 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 HESX1Q9UBX0 185 aa4.33□□□□□ -1.72
NCKAP1-204ENST00000477988 PHLDB1Q86UU1 1377 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 TCRBV5S1A1TA0A578 114 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 BTBD19C9JJ37 291 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 ADAM10O14672 748 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 ERC2O15083 957 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 TOMM40O96008 361 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 PIM1P11309 404 aaPredicted RBP4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 HOXD9P28356 352 aaPredicted RBP4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 PHKA1P46020 1223 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 PXNP49023 591 aaPredicted RBP4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 KIF23Q02241 960 aaPredicted RBP4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 E2F2Q14209 437 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 FAM187BQ17R55 369 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 LONRF3Q496Y0 759 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 C4orf46Q504U0 113 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 L1TD1Q5T7N2 865 aaKnown RBP4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 ARHGAP40Q5TG30 622 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 KRT26Q7Z3Y9 468 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 PIM3Q86V86 326 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 ADHFE1Q8IWW8 467 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 FAM46DQ8NEK8 389 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 SOCS4Q8WXH5 440 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 R3HDM4Q96D70 268 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 LENG8Q96PV6 779 aaPredicted RBP4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 SIGLEC11Q96RL6 698 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 EFHD1Q9BUP0 239 aa4.32□□□□□ -1.72
NCKAP1-204ENST00000477988 SERINC4A6NH21 518 aa4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 H3BNX3 289 aa4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 DCLK1O15075 740 aa4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 PDE8BO95263 885 aa4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 CRYABP02511 175 aaKnown RBP4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 MYCLP12524 364 aaPredicted RBP4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 KRT85P78386 507 aa4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 FHL3Q13643 280 aa4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 IQCB1Q15051 598 aa4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 UBAP2Q5T6F2 1119 aaKnown RBP4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 C18orf65Q6ZTR6 163 aa4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 CPA6Q8N4T0 437 aa4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 FAXDC2Q96IV6 333 aa4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 CIPCQ9C0C6 399 aa4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 PUS7LQ9H0K6 701 aaKnown RBP4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 PROCRQ9UNN8 238 aa4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 SQORQ9Y6N5 450 aa4.31□□□□□ -1.72
NCKAP1-204ENST00000477988 SLC16A6O15403 523 aa4.3□□□□□ -1.72
NCKAP1-204ENST00000477988 TLR2O60603 784 aa4.3□□□□□ -1.72
NCKAP1-204ENST00000477988 CNOT3O75175 753 aaKnown RBP4.3□□□□□ -1.72
NCKAP1-204ENST00000477988 VIL1P09327 827 aaKnown RBP4.3□□□□□ -1.72
NCKAP1-204ENST00000477988 T-ENOLP0DO92 83 aa4.3□□□□□ -1.72
NCKAP1-204ENST00000477988 ME1P48163 572 aa4.3□□□□□ -1.72
NCKAP1-204ENST00000477988 THEMIS2Q5TEJ8 643 aa4.3□□□□□ -1.72
NCKAP1-204ENST00000477988 CBARPQ8N350 705 aaPredicted RBP4.3□□□□□ -1.72
NCKAP1-204ENST00000477988 TNPO1Q92973 898 aaKnown RBP4.3□□□□□ -1.72
NCKAP1-204ENST00000477988 MOGAT1Q96PD6 335 aa4.3□□□□□ -1.72
NCKAP1-204ENST00000477988 TRMOQ9BU70 441 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms