RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 B3GALNT2Q8NCR0 500 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 NELFBQ8WX92 580 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 ELSPBP1Q96BH3 223 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 ZFYVE19Q96K21 471 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 SLC22A12Q96S37 553 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 ARID3AQ99856 593 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 TSPY26PQ9H489 355 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 ZFP14Q9HCL3 533 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 ABCB6Q9NP58 842 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 ARHGEF3Q9NR81 526 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 MAGEC2Q9UBF1 373 aaPredicted RBP18.82■□□□□ 0.6
PTPN7-209ENST00000477554 WNT16Q9UBV4 365 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 CCL26Q9Y258 94 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 ZNF638Q14966 1978 aaKnown RBP18.81■□□□□ 0.6
PTPN7-209ENST00000477554 HEPACAM2A8MVW5 462 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 F8VP50 259 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 CETN3O15182 167 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 KRT13P13646 458 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 CCDC130P13994 396 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 NOP14P78316 857 aaKnown RBP18.81■□□□□ 0.6
PTPN7-209ENST00000477554 TCF15Q12870 199 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 VEPH1Q14D04 833 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 SGSM1Q2NKQ1 1148 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 DCAF17Q5H9S7 520 aaPredicted RBP18.81■□□□□ 0.6
PTPN7-209ENST00000477554 ITIH5Q86UX2 942 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 C12orf29Q8N999 325 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 WHAMMQ8TF30 809 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 TATDN2Q93075 761 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 KCNK16Q96T55 309 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 PHOX2BQ99453 314 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 NAT10Q9H0A0 1025 aaKnown RBP18.81■□□□□ 0.6
PTPN7-209ENST00000477554 MFSD1Q9H3U5 465 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 TBC1D17Q9HA65 648 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 TMEM8AQ9HCN3 771 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 HEBP1Q9NRV9 189 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 HCN4Q9Y3Q4 1203 aa18.81■□□□□ 0.6
PTPN7-209ENST00000477554 KIF26AQ9ULI4 1882 aaPredicted RBP18.8■□□□□ 0.6
PTPN7-209ENST00000477554 BEST1O76090 585 aa18.8■□□□□ 0.6
PTPN7-209ENST00000477554 NOL4O94818 638 aa18.8■□□□□ 0.6
PTPN7-209ENST00000477554 EPB41P11171 864 aaKnown RBP18.8■□□□□ 0.6
PTPN7-209ENST00000477554 GLULP15104 373 aa18.8■□□□□ 0.6
PTPN7-209ENST00000477554 NDST1P52848 882 aa18.8■□□□□ 0.6
PTPN7-209ENST00000477554 DPCR1Q3MIW9 517 aa18.8■□□□□ 0.6
PTPN7-209ENST00000477554 ASTLQ6HA08 431 aaPredicted RBP18.8■□□□□ 0.6
PTPN7-209ENST00000477554 MAB21L3Q8N8X9 362 aa18.8■□□□□ 0.6
PTPN7-209ENST00000477554 LEMD2Q8NC56 503 aa18.8■□□□□ 0.6
PTPN7-209ENST00000477554 FUBP3Q96I24 572 aaKnown RBP eCLIP18.8■□□□□ 0.6
PTPN7-209ENST00000477554 CYP2S1Q96SQ9 504 aa18.8■□□□□ 0.6
PTPN7-209ENST00000477554 BCO2Q9BYV7 579 aa18.8■□□□□ 0.6
PTPN7-209ENST00000477554 TRPV4Q9HBA0 871 aa18.8■□□□□ 0.6
PTPN7-209ENST00000477554 DCNP07585 359 aaKnown RBP18.79■□□□□ 0.6
PTPN7-209ENST00000477554 CD58P19256 250 aa18.79■□□□□ 0.6
PTPN7-209ENST00000477554 GRIK1P39086 918 aa18.79■□□□□ 0.6
PTPN7-209ENST00000477554 MAGEA11P43364 429 aa18.79■□□□□ 0.6
PTPN7-209ENST00000477554 FKBP3Q00688 224 aaKnown RBP18.79■□□□□ 0.6
PTPN7-209ENST00000477554 ANO6Q4KMQ2 910 aa18.79■□□□□ 0.6
PTPN7-209ENST00000477554 SLC44A4Q53GD3 710 aa18.79■□□□□ 0.6
PTPN7-209ENST00000477554 TCERG1LQ5VWI1 586 aa18.79■□□□□ 0.6
PTPN7-209ENST00000477554 FUKQ8N0W3 1084 aa18.79■□□□□ 0.6
PTPN7-209ENST00000477554 TTC8Q8TAM2 541 aa18.79■□□□□ 0.6
PTPN7-209ENST00000477554 SLC35C1Q96A29 364 aa18.79■□□□□ 0.6
PTPN7-209ENST00000477554 FAM49BQ9NUQ9 324 aa18.79■□□□□ 0.6
PTPN7-209ENST00000477554 USP34Q70CQ2 3546 aa18.79■□□□□ 0.6
PTPN7-209ENST00000477554 C2orf78A6NCI8 922 aa18.78■□□□□ 0.6
PTPN7-209ENST00000477554 ARNTLO00327 626 aa18.78■□□□□ 0.6
PTPN7-209ENST00000477554 GDI1P31150 447 aa18.78■□□□□ 0.6
PTPN7-209ENST00000477554 MXI1P50539 228 aa18.78■□□□□ 0.6
PTPN7-209ENST00000477554 RPL10AP62906 217 aaKnown RBP18.78■□□□□ 0.6
PTPN7-209ENST00000477554 TAF12Q16514 161 aa18.78■□□□□ 0.6
PTPN7-209ENST00000477554 KRT39Q6A163 491 aa18.78■□□□□ 0.6
PTPN7-209ENST00000477554 C4orf50Q6ZRC1 276 aa18.78■□□□□ 0.6
PTPN7-209ENST00000477554 ZMIZ2Q8NF64 920 aa18.78■□□□□ 0.6
PTPN7-209ENST00000477554 DHTKD1Q96HY7 919 aaPredicted RBP18.78■□□□□ 0.6
PTPN7-209ENST00000477554 TSG101Q99816 390 aa18.78■□□□□ 0.6
PTPN7-209ENST00000477554 ELOVL4Q9GZR5 314 aa18.78■□□□□ 0.6
PTPN7-209ENST00000477554 TASP1Q9H6P5 420 aa18.78■□□□□ 0.6
PTPN7-209ENST00000477554 PSMA7O14818 248 aa18.77■□□□□ 0.6
PTPN7-209ENST00000477554 SLC16A3O15427 465 aaKnown RBP18.77■□□□□ 0.6
PTPN7-209ENST00000477554 CSH1P0DML2 217 aa18.77■□□□□ 0.6
PTPN7-209ENST00000477554 CSH2P0DML3 217 aa18.77■□□□□ 0.6
PTPN7-209ENST00000477554 AOC1P19801 751 aa18.77■□□□□ 0.6
PTPN7-209ENST00000477554 ERCC5P28715 1186 aaPredicted RBP18.77■□□□□ 0.6
PTPN7-209ENST00000477554 SOX9P48436 509 aa18.77■□□□□ 0.6
PTPN7-209ENST00000477554 PGFP49763 221 aa18.77■□□□□ 0.6
PTPN7-209ENST00000477554 ZXDBP98169 803 aa18.77■□□□□ 0.6
PTPN7-209ENST00000477554 LRRC63Q05C16 580 aa18.77■□□□□ 0.6
PTPN7-209ENST00000477554 IFRD2Q12894 506 aaPredicted RBP18.77■□□□□ 0.6
PTPN7-209ENST00000477554 MLF2Q15773 248 aaPredicted RBP18.77■□□□□ 0.6
PTPN7-209ENST00000477554 FAM35AQ86V20 835 aa18.77■□□□□ 0.6
PTPN7-209ENST00000477554 MYRFLQ96LU7 910 aa18.77■□□□□ 0.6
PTPN7-209ENST00000477554 STK25O00506 426 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 FAM163BP0C2L3 166 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 PSMC3P17980 439 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 CDC25CP30307 473 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 TNK2Q07912 1038 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 ZNF394Q53GI3 561 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 WDR44Q5JSH3 913 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 MFSD6LQ8IWD5 586 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 CMTM8Q8IZV2 173 aa18.76■□□□□ 0.59
PTPN7-209ENST00000477554 SCAMP5Q8TAC9 235 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms