RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 PDXKO00764 312 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 RPN1P04843 607 aaKnown RBP16.78■□□□□ 0.28
CLDN11-204ENST00000477531 CKMP06732 381 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 USP17L7P0C7H9 530 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 CHRNB1P11230 501 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 CTHP32929 405 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 SOX9P48436 509 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 CASP4P49662 377 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 PDE6CP51160 858 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 BECN1Q14457 450 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 ZNF268Q14587 947 aaPredicted RBP16.78■□□□□ 0.28
CLDN11-204ENST00000477531 CCDC142Q17RM4 750 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 MDH1BQ5I0G3 518 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 DGKKQ5KSL6 1271 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 ZNF687Q8N1G0 1237 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 PARD3BQ8TEW8 1205 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 ZNF516Q92618 1163 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 USP13Q92995 863 aaPredicted RBP16.78■□□□□ 0.28
CLDN11-204ENST00000477531 EXOC4Q96A65 974 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 SPATA17Q96L03 361 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 CRTAC1Q9NQ79 661 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 PRMT8Q9NR22 394 aaPredicted RBP16.78■□□□□ 0.28
CLDN11-204ENST00000477531 ZDHHC9Q9Y397 364 aa16.78■□□□□ 0.28
CLDN11-204ENST00000477531 A0A1W2PQ27 194 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 A0A1W2PQ64 194 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 A0A1W2PQD8 194 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 A8MXQ7 604 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 NR3C1P04150 777 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 P4HA1P13674 534 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 PTPN1P18031 435 aaKnown RBP16.77■□□□□ 0.28
CLDN11-204ENST00000477531 CXCL12P48061 93 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 NDUFA8P51970 172 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 MYL6P60660 151 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 TNK2Q07912 1038 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 RUNX3Q13761 415 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 NCOA4Q13772 614 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 ZNF699Q32M78 642 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 ZNF667Q5HYK9 610 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 CEP135Q66GS9 1140 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 TSSK4Q6SA08 328 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 DENND5BQ6ZUT9 1274 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 PCED1BQ96HM7 432 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 KCTD10Q9H3F6 313 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 DMAC2Q9NW81 257 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 TRPM5Q9NZQ8 1165 aa16.77■□□□□ 0.28
CLDN11-204ENST00000477531 ATP8B3O60423 1300 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 FAM237AA0A1B0GTK4 181 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 FAM160A1Q05DH4 1040 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 KCNB1Q14721 858 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 PON2Q15165 354 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 PDGFRLQ15198 375 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 SYNPOQ8N3V7 929 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 SPEM1Q8N4L4 309 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 ZBTB44Q8NCP5 570 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 TTC16Q8NEE8 873 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 TMEM174Q8WUU8 243 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 RUBCNQ92622 972 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 SECISBP2LQ93073 1101 aaKnown RBP16.76■□□□□ 0.27
CLDN11-204ENST00000477531 ELOVL4Q9GZR5 314 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 VRTNQ9H8Y1 702 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 CCL26Q9Y258 94 aa16.76■□□□□ 0.27
CLDN11-204ENST00000477531 EP300Q09472 2414 aaPredicted RBP16.76■□□□□ 0.27
CLDN11-204ENST00000477531 ZNF638Q14966 1978 aaKnown RBP16.75■□□□□ 0.27
CLDN11-204ENST00000477531 LRRIQ3A6PVS8 624 aaPredicted RBP16.75■□□□□ 0.27
CLDN11-204ENST00000477531 TADA3O75528 432 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 C4BPAP04003 597 aaKnown RBP16.75■□□□□ 0.27
CLDN11-204ENST00000477531 HDCP19113 662 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 TRIM21P19474 475 aaKnown RBP16.75■□□□□ 0.27
CLDN11-204ENST00000477531 PPP3CCP48454 512 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 GRSF1Q12849 480 aaKnown RBP eCLIP16.75■□□□□ 0.27
CLDN11-204ENST00000477531 MTF1Q14872 753 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 SGSM1Q2NKQ1 1148 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 TDRD10Q5VZ19 366 aaKnown RBP16.75■□□□□ 0.27
CLDN11-204ENST00000477531 TXNDC11Q6PKC3 985 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 KRBA2Q6ZNG9 492 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 B3GALNT2Q8NCR0 500 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 TMC2Q8TDI7 906 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 CHAMP1Q96JM3 812 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 TNIP3Q96KP6 325 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 C8orf48Q96LL4 319 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 FAM83CQ9BQN1 747 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 GZF1Q9H116 711 aaPredicted RBP16.75■□□□□ 0.27
CLDN11-204ENST00000477531 XYLT2Q9H1B5 865 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 EBF3Q9H4W6 596 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 PATJQ8NI35 1801 aa16.75■□□□□ 0.27
CLDN11-204ENST00000477531 COL4A2P08572 1712 aa16.74■□□□□ 0.27
CLDN11-204ENST00000477531 GOLGA6L4A6NEF3 574 aa16.74■□□□□ 0.27
CLDN11-204ENST00000477531 F8VP50 259 aa16.74■□□□□ 0.27
CLDN11-204ENST00000477531 RHOBTB3O94955 611 aa16.74■□□□□ 0.27
CLDN11-204ENST00000477531 PFKLP17858 780 aa16.74■□□□□ 0.27
CLDN11-204ENST00000477531 RPL13P26373 211 aaKnown RBP16.74■□□□□ 0.27
CLDN11-204ENST00000477531 IFNAR2P48551 515 aa16.74■□□□□ 0.27
CLDN11-204ENST00000477531 CLDN10P78369 228 aa16.74■□□□□ 0.27
CLDN11-204ENST00000477531 TRIM68Q6AZZ1 485 aa16.74■□□□□ 0.27
CLDN11-204ENST00000477531 CPA6Q8N4T0 437 aa16.74■□□□□ 0.27
CLDN11-204ENST00000477531 ARL14EPQ8N8R7 260 aaPredicted RBP16.74■□□□□ 0.27
CLDN11-204ENST00000477531 PLEKHO2Q8TD55 490 aa16.74■□□□□ 0.27
CLDN11-204ENST00000477531 SLITRK1Q96PX8 696 aa16.74■□□□□ 0.27
CLDN11-204ENST00000477531 CYP2S1Q96SQ9 504 aa16.74■□□□□ 0.27
CLDN11-204ENST00000477531 MED10Q9BTT4 135 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms