RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 ZNF268Q14587 947 aaPredicted RBP13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 MDH1BQ5I0G3 518 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 PARM1Q6UWI2 310 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 DENND5BQ6ZUT9 1274 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 MON1AQ86VX9 555 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 HS6ST3Q8IZP7 471 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 SEMA4DQ92854 862 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 DNASE1L2Q92874 299 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 FGF14Q92915 247 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 TCEAL4Q96EI5 215 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 HNRNPABQ99729 332 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 SDCBP2Q9H190 292 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 KIF9Q9HAQ2 790 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 DMAP1Q9NPF5 467 aaPredicted RBP13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 ANO10Q9NW15 660 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 IL37Q9NZH6 218 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 A0A1W2PRU2 124 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 FAM92AA1XBS5 289 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 CLSTN1O94985 981 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 TCF3P15923 654 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 BDNFP23560 247 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 FCARP24071 287 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 GRIK1P39086 918 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 TYRO3Q06418 890 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 FCHO2Q0JRZ9 810 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 KCNH2Q12809 1159 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 TEAD2Q15562 447 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 STX1AQ16623 288 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 DDR2Q16832 855 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 DPCR1Q3MIW9 517 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 ZSCAN23Q3MJ62 389 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 FAM78AQ5JUQ0 283 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 SPOPLQ6IQ16 392 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 C1orf228Q6PIY5 440 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 ENOSF1Q7L5Y1 443 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 FAM35AQ86V20 835 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 FUKQ8N0W3 1084 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 PDZD8Q8NEN9 1154 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 MRPS31Q92665 395 aaKnown RBP13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 MCRS1Q96EZ8 462 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 MSANTD3Q96H12 275 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 NT5C1BQ96P26 610 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 MED15Q96RN5 788 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 LPIN3Q9BQK8 851 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 LRFN3Q9BTN0 628 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 B3GNT5Q9BYG0 378 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 UBXN6Q9BZV1 441 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 ATXN3LQ9H3M9 355 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 ZNF334Q9HCZ1 680 aaPredicted RBP13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 CISHQ9NSE2 258 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 TECTAO75443 2155 aa13.13□□□□□ -0.31
CLCNKA-205ENST00000477360 HCRTO43612 131 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 SOAT2O75908 522 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 GLULP15104 373 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 PSMC3P17980 439 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 RAP1GAPP47736 663 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 CLCN5P51795 746 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 STX17P56962 302 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 PLCB2Q00722 1185 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 PRKCQQ04759 706 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 SNX30Q5VWJ9 437 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 ARHGAP17Q68EM7 881 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 PHLDB3Q6NSJ2 640 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 SCARA5Q6ZMJ2 495 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 PAQR9Q6ZVX9 377 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 TMEM150AQ86TG1 271 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 ACOT1Q86TX2 421 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 MFSD6LQ8IWD5 586 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 SCN4BQ8IWT1 228 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 NUP93Q8N1F7 819 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 FBXL6Q8N531 539 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 EHBP1Q8NDI1 1231 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 LMO3Q8TAP4 145 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 ZSCAN18Q8TBC5 510 aaPredicted RBP13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 ENOX1Q8TC92 643 aaKnown RBP13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 WHAMMQ8TF30 809 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 IRF7Q92985 503 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 TMEM176AQ96HP8 235 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 SHDQ96IW2 340 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 CNOT6LQ96LI5 555 aaKnown RBP13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 SLITRK1Q96PX8 696 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 PRRX2Q99811 253 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 DPEP3Q9H4B8 488 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 MMRN2Q9H8L6 949 aa13.12□□□□□ -0.31
CLCNKA-205ENST00000477360 SYCE3A1L190 88 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 F8VP50 259 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 TNFRSF10BO14763 440 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 CAVIN2O95810 425 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 PAEPP09466 180 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 FAM200BP0CF97 657 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 EEF1GP26641 437 aaKnown RBP13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 TUBP50607 506 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 STILQ15468 1287 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 MEA1Q16626 185 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 TPD52L1Q16890 204 aaPredicted RBP13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 GPR158Q5T848 1215 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 IRF2BP1Q8IU81 584 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 CMTM8Q8IZV2 173 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 ZNF276Q8N554 614 aa13.11□□□□□ -0.31
CLCNKA-205ENST00000477360 CELF5Q8N6W0 485 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms